Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1648 ATGTCTTACGATGATGCTGGCACTTCTTTCCATTATCTCGACCCCAATGATGCTTGTTGGTCGAACGCGATGCAGCAGCTGGGCGGTGATCATAACTGGTTCGAAAATGAAAACGATGATCATATGCACCACATGGTCACCGCATGCAGCGACCAAGAAACGCACGCGGACACCGGCGACGTGGACTCCGTCAAGGTTCAGTTGCATACCTTGGAGTCTGGCTTCGACATAGATAATCAAGATTTCAAAGATTTCTTGGACGACCTTGATGCCGCCACTCCTCCTCCTGCGGTTCTTGATCCTGCAATGGACTCGTTCGACAATGGTGATGCCTTCTTCCTCTTGGGTGACTCCTTGGACATCGATGCCTCCATCAACATGGATTCCATGGACTCCTTGAACTTTGAGATGGTGGATGAGTTATTCAAAAATATTTTGGCTGAGGAGGTTCCCACCTCAGATGACGTTCTTTCTCCCGCTACGGCTGATGTTCATACTCCTCAGTGGATTTCACCTCCTCCCACGTCACCACAGGAGGAGGAAGAGCAAGCATTTAACAGCAACAGCCACAATCACTTGCCGCTGCAATCTTTACCACCAGAGGAGGAGAAACAAATTTTTGACAACAATAGCCACGATCACTTGTCACCCCAATCTACAAATTCCAACGATTACTCATCTGTGTTTGTTCCTCGTCACAAGAATTACAAGCATTGGACTCAAACTGAACACAGATTATTTCTTCTTGGACTTGAGAGATATGGAAAAGGAAAGTGGAAGCAAATCTCAACACATTTTATTCCATCAAGAACTCCCTCTCAAGTAGCAAGTCATGCTCAAAAATATTTTATGCACAGAAATGTCTCTGAAAAAACGAAGAGAACAAGCATTCATGATACAACCCTGCATGACCCTGACATGAGTGTTGCTAATCTCCACCTTGATCAACAACAATACAATTGGGTTCCTACTTTCACTCCAGATTTTGCTATGCAGCCACAGCAAATGCATGACCCTGACATGAGTGTTGCTAATCTCCACCTTGATCAACAACAATACAATTGGGTTCCTACTTTCACTCCAGATTTTGCGATGCAGCCACAGCAAATCATGCATCAAGCACCAAGACAATTCAACCTTTCATAG 1146 0.4503 MSYDDAGTSFHYLDPNDACWSNAMQQLGGDHNWFENENDDHMHHMVTACSDQETHADTGDVDSVKVQLHTLESGFDIDNQDFKDFLDDLDAATPPPAVLDPAMDSFDNGDAFFLLGDSLDIDASINMDSMDSLNFEMVDELFKNILAEEVPTSDDVLSPATADVHTPQWISPPPTSPQEEEEQAFNSNSHNHLPLQSLPPEEEKQIFDNNSHDHLSPQSTNSNDYSSVFVPRHKNYKHWTQTEHRLFLLGLERYGKGKWKQISTHFIPSRTPSQVASHAQKYFMHRNVSEKTKRTSIHDTTLHDPDMSVANLHLDQQQYNWVPTFTPDFAMQPQQMHDPDMSVANLHLDQQQYNWVPTFTPDFAMQPQQIMHQAPRQFNLS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1648 381 SUPERFAMILY Homeodomain-like 233 286 IPR009057 -
Aed7g1648 381 PANTHER TRANSCRIPTION FACTOR SRM1 206 322 - -
Aed7g1648 381 CDD SANT 239 283 IPR001005 -
Aed7g1648 381 PANTHER TRANSCRIPTION FACTOR KUA1 206 322 - -
Aed7g1648 381 MobiDBLite consensus disorder prediction 164 195 - -
Aed7g1648 381 Gene3D - 236 288 - -
Aed7g1648 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 239 287 IPR017930 -
Aed7g1648 381 SMART sant 235 285 IPR001005 -
Aed7g1648 381 ProSiteProfiles Myb-like domain profile. 239 283 IPR001005 -
Aed7g1648 381 ProSiteProfiles SANT domain profile. 239 287 IPR017884 -
Aed7g1648 381 MobiDBLite consensus disorder prediction 164 196 - -
Aed7g1648 381 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 236 285 IPR006447 GO:0003677
Aed7g1648 381 Pfam Myb-like DNA-binding domain 238 283 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1648 Aed-Chr7 19765224 19766804 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed7g1648 Myb_DNA-binding 2.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1648 - - gmx:102670504 119.398