Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1642 ATGTTGAAACAAAGTCAACCAATCCATGTTGTTCTTCTTCTTGCTTTGTTTTTCTATCCTCAAACCCTAGGTTTGGTTTTCCTGAACCTGTTTCGATTCCATTCCCGTTTCCTCCTTTTACCTGCGAAAAAAAAGGCAGGAGAAGGGGTTAATTTCAGTTTTCTTGCCATTAATGTTCTATGGGTGCAAACCATACGGAGGAGGACGATGATTCTTCTTCTCCATCTAGACATAACAACGATGAAAATAAAAATAAGAGTTCTCATAATCATGATAATGACAAGGATTTATCTCCATCTCCATCATCATCACCAAAATCTGATGATGAATTCTTCCCCTCCTCCTAATTATTATGCAAGTAAACACTCACAACCACTGTCACCATCACTACGGTCACGGCCACAATTCTATGCTCCACCTCCTGATAGGCCTAATTTGCCCCATAATGATTCAAGCCCAGGAGCCTCTAACACGCCAAAATCAGGCCACCATGGCCTGTTTGGTGCTGCAAATTTGCCGGGTTCTTCCGGTGATGATTCAGTAAAATATATTGGCTATACACTTGTTGGGATTTTTGCTGTTGCCTTTGTTTCTGTAGCTGTAGCTCTTGCTTTCGTGTTTAAGAAGAAGAAATCAAGAGCGGATGCCTATTTTACACCCTATATGCCACCCGTTAATATTCATGTAAAATCAGGTGCTAATGGGCATTACTATGTACAGCAGCCTCTCCCATCACCTCCCGTTGCAAGCAACACCTACGGAATCGGGAACATTAATAATGCAGCCAGCAGCAAGCACCACATAGCAGCATCATTCGACTCAACTTTCAAAAGTGTTGCTGACTTTGGACTTGCTAGGCTAGCTGATGCTGCCAATAGCCATGTATCAACAAGGGTCGTGGGCTCCTTTGGGTACATGGCTCCAGAATATGCAACAAGTGGAAAATTAACGGATAGAGCAGATGTTTTCTCATTTGGGGTTGTCCTTCTTGAGCTTGTTACAGGAAGGAAACCTGTTGATAAAACTCAGCCTTTGGGAGATGAGAGTTTGGTTGCTTGGGCTCGTCCACTTCTCCATCGTGCAATTGAAAGACGTGACTTTAGTGATCTAATAGATCCAAGACTCCAAAATCAATTTGTGGAGAGTGAAATGTTCAGAATGATTGAGGCAGCCGCAGCTTGTGTTGTAAGAGCCTTGGATTGTGGAGATGAAAATTCTGGTCTATCTAATGGGGTGAAATATGGTGATAGCATGCATTATGATTCTGGCCAATATGATAAAGAAATTTCGATATTCAGGAGAATGGTCAATGGCACCTTTGTTGATTCTGATTTTGATATGTATAGTGGAGAATTGAGTTTGTCAAGAGACACCTCAATGACCTCAAGAGGATCCCAACAAGAGTTGATGAGGCATAGTTCTAGCGGCGAGTCAGAAACTAGAGTTATCAACATGCATAGGAACAGTCTTGAATGA 1476 0.4207 MLKQSQPIHVVLLLALFFYPQTLGLVFLNLFRFHSRFLLLPAKKKAGEGVNFSFLAINVLWVQTIRRRTMILLLHLDITTMKIKIRVLIIMIMTRIYLHLHHHHQNLMMNSSPPPNYYASKHSQPLSPSLRSRPQFYAPPPDRPNLPHNDSSPGASNTPKSGHHGLFGAANLPGSSGDDSVKYIGYTLVGIFAVAFVSVAVALAFVFKKKKSRADAYFTPYMPPVNIHVKSGANGHYYVQQPLPSPPVASNTYGIGNINNAASSKHHIAASFDSTFKSVADFGLARLADAANSHVSTRVVGSFGYMAPEYATSGKLTDRADVFSFGVVLLELVTGRKPVDKTQPLGDESLVAWARPLLHRAIERRDFSDLIDPRLQNQFVESEMFRMIEAAAACVVRALDCGDENSGLSNGVKYGDSMHYDSGQYDKEISIFRRMVNGTFVDSDFDMYSGELSLSRDTSMTSRGSQQELMRHSSSGESETRVINMHRNSLE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1642 491 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 278 468 - -
Aed7g1642 491 Pfam Protein kinase domain 279 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1642 491 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 109 249 - -
Aed7g1642 491 Gene3D Transferase(Phosphotransferase) domain 1 262 400 - -
Aed7g1642 491 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 109 249 - -
Aed7g1642 491 MobiDBLite consensus disorder prediction 456 491 - -
Aed7g1642 491 MobiDBLite consensus disorder prediction 118 169 - -
Aed7g1642 491 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 278 468 - -
Aed7g1642 491 SUPERFAMILY Protein kinase-like (PK-like) 279 396 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1642 Aed-Chr7 19672368 19678215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1642 272 474 Trihelix Transcription Factor Family AT1G70460 56.682 2.49e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Aed7g1642 Pkinase 9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1642 - - gmx:100797563 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1642 7 19672368 19678215 Aed7g1642 7 19672368 19678215 ECH