Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1641 ATGAGTGGTTTGGGTGTAGTAGAGTGGCTTAGACCCCTTGTCAAGACCAATGCTTGGGATTATGCAGTTGTTTGGAAATATGGTGATGACCCAACAAGGTACTACTACTATTGCAATAGCCATGATTCAATTGGAACTCAAGTTTTGATCCCTATTGTTGGTGGTCTTATTGAGCTCTTCACTGAAAATCTGATTCCAATGGATATGAATATCATAGAGTTCATAACAGCACATGGTTGTGGTGTCCCTTTAAAGCAAGAAGCCATGTCTGCACAGAGCTACACCAGTCTGAACATCAATGAACATCAATACTCCCAGTGGTGTTCACCACCACACATGTCAACATTAACTCCTAGTGTCCTTGACCATGCAACAAAACAATGCAGCTCCCATCCTAGCATTGAAGGACCCTCCATTGAGTCTAATCCTTCAACTGAAGAACCATCATTTGATTCAAAGTTTGTTGGTTTCATTCCAAATGAGTATCTAAAACAACCAGTTAAAATATCTCCCATCCCCAAAACTAGAACACCAAAGTACAACAAAACTTCAGGGAAACAGCAGAGAGGTTTGAGTTCCGGTTGCAGCAACAGGGAAGACGGTAAATCAAAACCGGTCAAGGAGTCTCAGAAGGAAGTTTACCAGGCTAAAAATCTTGTCACAGAGAGAAATAGGAGGAACAAGATAAAAGAAGGGCTTTTTACTCTGCGGTCTCTAGTCCCAAAGATAAGCAAGATGGATAGAGCTGCAATTCTTGCTGACGCGGTTGACCATATAAAGGAATTGCAAACGCAAGTAAATGAACTCAAAGATGAGGTCAGGGCTCTGGAGGAACAGGACTGTGAGAAGAACACACAACAATTGAGGATAACAACAGGCAAAGAACAAGGAGTCAGAAGTAACCCTCTTAATCAAAGTTCTAATGGTTGCACTAAAAAGATGCAAATGGAGAAGTATGGTGGGTTCTCAAAGTTGATGGCAGCTATACATTCAATTGGACTAAAGGTGGATAGTGCCAATGTGACCACATTTGATGGCAAAGTCCAGAATATTTTGACGGTTAAGGCAACCAAGCAGGATATTTACCCAACTAAACTGAAAGAGTATTTAATACAGAAGACAAGTGATCATAGACAAGGTAGCAAACAAGTTCAGGAAAATGGTGGTGATATGAAGAGTTCAAGAAAGTAA 1191 0.4081 MSGLGVVEWLRPLVKTNAWDYAVVWKYGDDPTRYYYYCNSHDSIGTQVLIPIVGGLIELFTENLIPMDMNIIEFITAHGCGVPLKQEAMSAQSYTSLNINEHQYSQWCSPPHMSTLTPSVLDHATKQCSSHPSIEGPSIESNPSTEEPSFDSKFVGFIPNEYLKQPVKISPIPKTRTPKYNKTSGKQQRGLSSGCSNREDGKSKPVKESQKEVYQAKNLVTERNRRNKIKEGLFTLRSLVPKISKMDRAAILADAVDHIKELQTQVNELKDEVRALEEQDCEKNTQQLRITTGKEQGVRSNPLNQSSNGCTKKMQMEKYGGFSKLMAAIHSIGLKVDSANVTTFDGKVQNILTVKATKQDIYPTKLKEYLIQKTSDHRQGSKQVQENGGDMKSSRK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1641 396 MobiDBLite consensus disorder prediction 168 211 - -
Aed7g1641 396 Gene3D - 205 280 IPR036638 GO:0046983
Aed7g1641 396 MobiDBLite consensus disorder prediction 126 149 - -
Aed7g1641 396 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 213 262 IPR011598 GO:0046983
Aed7g1641 396 PANTHER TRANSCRIPTION FACTOR BHLH90 35 375 - -
Aed7g1641 396 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 35 375 - -
Aed7g1641 396 SMART finulus 219 268 IPR011598 GO:0046983
Aed7g1641 396 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 214 278 IPR036638 GO:0046983
Aed7g1641 396 MobiDBLite consensus disorder prediction 372 396 - -
Aed7g1641 396 Pfam Helix-loop-helix DNA-binding domain 220 263 IPR011598 GO:0046983
Aed7g1641 396 Coils Coil 252 279 - -
Aed7g1641 396 MobiDBLite consensus disorder prediction 126 150 - -
Aed7g1641 396 MobiDBLite consensus disorder prediction 176 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1641 Aed-Chr7 19668894 19671939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1641 41 395 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 26.555 2.03e-31 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed7g1641 HLH 4.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1641 - - gsj:114423672 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1641 7 19668894 19671939 Aed7g1641 7 19668894 19671939 ECH