Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1624 ATGTCAACACTGAACCATCTCTTTGATCTTCCAGATCAGATATGCTACGTACAATGTGGATTCTGTGCCACAATATTAATGGTAAGCGTTCCATGCAGCATTTTGTCAACATTGGTGACAGTCAGATGTGGCCACTGCACAAGCCTCCTCTCTGTCAATATGAAGAAAGCTTCCTTTGTCCCTTTCCACCTTCTTGCTTCCCTGACTCATGTTGAGCAAAAAGAAAGTGCTTCAGAAGATGGTGCAAACAAGACTTTGAACAGCTATAATAACACATCCATAATGACCAATTCGGACTGTGAGGAAGAGAACATGACTCAAATTTCCAATGTTGTGAATAAACTGAAATGCAGAGAAGAGATTAAGAGGCTAAAGGCTGAAAACCCTAAAATGGCCCACAAGGAGGCTTTCAGCACTGCTGCAAAAAATTGGGCCAATTTCCCTCCTTCACAGTGTAATGGAGAAGCAGACAGCTGTAACCAGACAGAGCAACTTGTGGATCTGGACTCCCATGAAGAGCCTCGTGATTATGCTATTCAGGTTAATAAAGAAGGCCAAGGTTTCCGTGGAAGAAAGGTTGCAAGGAATTCTATCTTGGCAAGGACACCTTTTGAGTGA 618 0.4288 MSTLNHLFDLPDQICYVQCGFCATILMVSVPCSILSTLVTVRCGHCTSLLSVNMKKASFVPFHLLASLTHVEQKESASEDGANKTLNSYNNTSIMTNSDCEEENMTQISNVVNKLKCREEIKRLKAENPKMAHKEAFSTAAKNWANFPPSQCNGEADSCNQTEQLVDLDSHEEPRDYAIQVNKEGQGFRGRKVARNSILARTPFE 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1624 205 Pfam YABBY protein 11 150 IPR006780 GO:0007275
Aed7g1624 205 PANTHER AXIAL REGULATOR YABBY 4 1 169 - -
Aed7g1624 205 PANTHER PROTEIN YABBY 6-RELATED 1 169 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1624 Aed-Chr7 19468594 19471372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1624 2 205 C2C2-YABBY Transcription Factor Family AT1G23420 48.718 6.97e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aed7g1624 YABBY 6.8e-39 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1624 K25796 - gmx:100803001 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1624 7 19468594 19471372 Aed7g1624 7 19468594 19471372 ECH