Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1616 ATGGCTGATTCAAACCCTGACAAGGTGTTACAAGTAAACGGTGATGATGACATTCAAGTCTCTGTGCCCCTTTTGCAAAAGTTGGTAGCAGAGATGATGGGGACCTACCTTTTGATATTTGTAGGGTGTGCTGCTATAATTATGAACCTTGACAACGACAAAGTTGTCACACTTCCTAGGGTTTGCATTGTTCACGGACTTACAATAATGGTTTTAATATATTCTCTTGGTGACATCTCCGATGCACATTTAAACCCTTATACAAACAAGACAATGCGAGAGATTACCAGGAGTTCCTCTTTCCTCAGAGCTCGGGAAGTTGTTGATCAGTGA 333 0.4144 MADSNPDKVLQVNGDDDIQVSVPLLQKLVAEMMGTYLLIFVGCAAIIMNLDNDKVVTLPRVCIVHGLTIMVLIYSLGDISDAHLNPYTNKTMREITRSSSFLRAREVVDQ 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1616 110 Gene3D Glycerol uptake facilitator protein. 13 93 IPR023271 -
Aed7g1616 110 PANTHER AQUAPORIN NIP1-1-RELATED 11 86 - -
Aed7g1616 110 Pfam Major intrinsic protein 21 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g1616 110 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g1616 110 PRINTS Major intrinsic protein family signature 26 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g1616 110 PANTHER AQUAPORIN NIP2-1 11 86 IPR034294 -
Aed7g1616 110 SUPERFAMILY Aquaporin-like 20 89 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1616 Aed-Chr7 19396038 19397023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1616 15 86 Major Intrinsic Protein MIP AT4G19030 65.278 4.30e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1616 K09874 - ath:AT4G19030 102.449