Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1606 ATGTTGAGAAGAGCCCCTCTTGTCAATTTCCACTGCCTTGTTCTCATTCTCATCATGAAGCATGCATTGCTATCAAAGCCAGTGATGGCAGAACCAAGAGCCGAAACTGTCAACATAACATGCAACAACAAGCTAGAGCACAACACCACCATCTTTGTTCCAAATTTCGTTGAAACCATGGAGAAGATCAGTGAGCAGATGCGTAGCACCGGCTACGGCACCGCAGTTGTAGGGACAGGAGGAGGACCTGACACCAACTACGGCATGGCTCAGTGCTATGGTGATCTCTCATTGCTTGACTGTGTGCTATGTTACGCCGAGGCGCGAACGGTTCTTCCACAATGCTTCCCTTACAACGGTGGCAGAATCTACCTTGATGGTTGCTTCATGAGGGCTGAGAACTACAGCTTCTATGATGAGTACTTAGGGCCAGGAGACAAGGCTGTTTGTGGAACAAACACGACAACAAGGAAGAGCACAAATTTTCAAGATGCAGCAAAGAAGGCTGTGTTGAGTGCTGTTCAAGCTGCACCAAACAATGAAGGGTATTATGCTAAGGAGGAGGTTGCTGTGGAAGGAGTAGCAAATAGTTCAGCTTATGTTCTGGCTAATTGTTGGAGGAGTTTGGACACAAAGTCTTGTAGAGCTTGTCTTGAGAACGCATCTTCTTCTATATTGGGGTGCTTGCCTTGGTCAGAAGGGAGAGCATTGTACACTGGATGCTTCATGAGTATGAGTTTCATTTTGCTGACTTGTGCAGGTAATGTATTAGTGATAGTGGTTGCAGTAGTCAGTTCAGTGATTGTATTGGTGGTTGGAATAGCTACTGTGGTTTATATCCGCAAACTCAGATATATTCAGATGAAAAGAAGAGGTTCAAATGATGCAGAAAAGTTAGCCAAGAGCCTTCACCACAATAGCTTGAACTTCAAGTACTCTACACTGGAGAAGGCTACCAATTCCTTTGATGAAGCTAACAGGCTTGGACAAGGAGGATTTGGAACGGTTTATAAAGGAGTTCTGGCTGATGGAAGAGAGATTGCTGTCAAGAGATTATATTTCAACAACAGACATAGAGCAGCAGATTTCTACAATGAAGTCAACATAATTAGCAGTGTGGAACACAAGAATCTAGTCAGACTCTTAGGATGCAGTTGTTCAGGACCTGAAAGCCTTCTTATATATGAATATCTACATAACAGAAGTCTTGATCGCTTCATATTTGGTCCTTTCAAGAAGATAAGAGTCACATTAACATGGAAGCATTTTCAGTCAGGGACTGCAGAACAACTAATTGATCCATGTCTAGTGTTGGATGACAACCATAGAAGCAATGTCGAGAATGAGATATTGAGAGTGTTGCACATAGGACTTCTATGCACCCAAGAAATCCCTTCCTTAAGACCATCCATGTCAAAGTCACTTAAGATGCTAACAAAGAAGGAGGAGCACTTGGAATTGGAAGCTCCTTCCAATCCACCCTTCATAGATGAAAGTACTATGGAACTCCATTACCAGAATGATGACCCGTTTTACCCTCTCAATGCAGCAGATTCATTGGCCACAATGTCTCATAGCTCATTTTATCCAAGGTAG 1596 0.4323 MLRRAPLVNFHCLVLILIMKHALLSKPVMAEPRAETVNITCNNKLEHNTTIFVPNFVETMEKISEQMRSTGYGTAVVGTGGGPDTNYGMAQCYGDLSLLDCVLCYAEARTVLPQCFPYNGGRIYLDGCFMRAENYSFYDEYLGPGDKAVCGTNTTTRKSTNFQDAAKKAVLSAVQAAPNNEGYYAKEEVAVEGVANSSAYVLANCWRSLDTKSCRACLENASSSILGCLPWSEGRALYTGCFMSMSFILLTCAGNVLVIVVAVVSSVIVLVVGIATVVYIRKLRYIQMKRRGSNDAEKLAKSLHHNSLNFKYSTLEKATNSFDEANRLGQGGFGTVYKGVLADGREIAVKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLIYEYLHNRSLDRFIFGPFKKIRVTLTWKHFQSGTAEQLIDPCLVLDDNHRSNVENEILRVLHIGLLCTQEIPSLRPSMSKSLKMLTKKEEHLELEAPSNPPFIDESTMELHYQNDDPFYPLNAADSLATMSHSSFYPR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1606 531 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Aed7g1606 531 ProSiteProfiles Protein kinase domain profile. 322 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1606 531 Pfam Protein tyrosine and serine/threonine kinase 326 407 IPR001245 GO:0004672|GO:0006468
Aed7g1606 531 SUPERFAMILY Protein kinase-like (PK-like) 302 420 IPR011009 -
Aed7g1606 531 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 13 411 - -
Aed7g1606 531 Gene3D Phosphorylase Kinase; domain 1 283 394 - -
Aed7g1606 531 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 416 512 - -
Aed7g1606 531 Gene3D - 146 247 IPR038408 -
Aed7g1606 531 Gene3D - 33 137 IPR038408 -
Aed7g1606 531 Gene3D Transferase(Phosphotransferase) domain 1 395 490 - -
Aed7g1606 531 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
Aed7g1606 531 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Aed7g1606 531 Pfam Salt stress response/antifungal 48 135 IPR002902 -
Aed7g1606 531 Pfam Salt stress response/antifungal 150 246 IPR002902 -
Aed7g1606 531 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 416 512 - -
Aed7g1606 531 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 13 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1606 Aed-Chr7 19192864 19198601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1606 392 531 Receptor kinase-like Gene Family AT1G70520 46.809 3.38e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed7g1606 PK_Tyr_Ser-Thr 4.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1606 - - ccaj:109816764 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1606 7 19192864 19198601 Aed7g1606 7 19192864 19198601 ECH