Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1603 ATGCTGTGGGTGGACAAATATCGTCCCAAAACCCTCGACCAGGTTATGGTCCACACCGACATCGCTCACAATCTCAAGAAATTGGTAATGGAACAAGATTGCCCCCATTTACTCTTCAATGGCCCGTCTGGCTCTGGCAAGAAAACCTTAATCATTGCTATTCTCTGCCAAATGTTCGGATCCGGTGCTGAAAAGGTGAAGGTGGAAAATAGGAACTGGAAAGTGAATGCTGGGAGTAGATCTATTGATATAGAGCTGACAACATTATCAAGTGCCAACCACATTGAAATGAGTCCAAGTGATGCAGGATTTCAGGATAGATACATTGTTCAGGAAGTAATCAAAGAACTGGCTAAGAATAGACCCATTGATACTAAGGGGAAGAAAGGATTTAGAGTACTTGTGCTCAATGATGTTGACAAACTCTCTAGAGAAGCCCAACATTCTCTCCGCAGAACAATGGAGAAATACAGTTCTTATTGCAGATTAATTCTATGTTGCAATAGTTCTTCTAGAGTCACAGAAGCAATCCGCTCTCGATGTCTCAATGTGCGAATAAATGCACCAAGTGAAGAACAGATTGTTGAAGTTTTAGATTTCATTGGTAAGAAAGAGGGGCTGCAACTTCCTCCTGGTTTTGCTGCTCGCATTGCGGAGAAATCAAATCGAAATTTAAGGAGGGCCATATTGTCATTTGAGGCTTGTCGTGTCCAACAGTTGTTTCAAGTTCGAGGAAAGCTCTATGATCTGCTAATCAATTGCATTCCTCCGGAGATCATTTTGAAGAGGCTTCTTTATGAGCTATTGAGGAAACTGGATGCAGAACTAAAGCATGAAGTATGTCATTGGGCTGCATATTATGAACATAGGATGCGTCTTGGACAGAAAGCAATATTTCACATTGAAGCATTTGTGGCCAAGTTTATGAGCATTTACAAATCCTTCCTTATTGCAACATTCGGCTGA 966 0.4141 MLWVDKYRPKTLDQVMVHTDIAHNLKKLVMEQDCPHLLFNGPSGSGKKTLIIAILCQMFGSGAEKVKVENRNWKVNAGSRSIDIELTTLSSANHIEMSPSDAGFQDRYIVQEVIKELAKNRPIDTKGKKGFRVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLDFIGKKEGLQLPPGFAARIAEKSNRNLRRAILSFEACRVQQLFQVRGKLYDLLINCIPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1603 321 Gene3D - 219 312 - -
Aed7g1603 321 SMART AAA_5 33 192 IPR003593 -
Aed7g1603 321 Pfam DNA polymerase III, delta subunit 20 188 - -
Aed7g1603 321 PANTHER REPLICATION FACTOR C SUBUNIT 3 237 313 - -
Aed7g1603 321 CDD HLD_clamp_RFC 189 238 - -
Aed7g1603 321 SUPERFAMILY post-AAA+ oligomerization domain-like 236 313 IPR008921 GO:0003677|GO:0006260
Aed7g1603 321 Gene3D - 1 189 IPR027417 -
Aed7g1603 321 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 2 239 - -
Aed7g1603 321 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 237 313 - -
Aed7g1603 321 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 240 IPR027417 -
Aed7g1603 321 CDD AAA 21 190 - -
Aed7g1603 321 PANTHER REPLICATION FACTOR C SUBUNIT 3 2 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1603 Aed-Chr7 19136231 19141583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1603 1 321 Core DNA Replication Machinery Family AT5G27740 75.706 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1603 K10756 - gmx:100818329 573.933