Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1594 ATGGTTTCATTCACTCACCTTTCTTTTCTTTTCTTCCCTTTGTTGACAACTTCCTTTGTTAGAGTTTGTGCCTCTGAGGAGAACTCCATCAAAACAACAAACTTGTCTCCTTTGAATTGCTCTTCCAACATCAGAAAATGCAATGCCTCACTCTACCACATATCCCAAAACCTCACAATTGAACAAATAGCCACTTTTTACTCGGTTATTTCTTCCCAAATCACACCAATATTGCATGGCACCAAACAACTAGACTACCTCATCACAGTACCTTGTTCATGCAAAAACACCACTAACCTTAGTGGATATTTCCATGACACAACCTACAAAGTAAGGCCACATGACACTTTTCAGAATATCTCAAACCTGATTTTCAGTGGGCAAGCTTGGCCAGTTAATAATAGTACTACAACACTGTTGCATCCAAATGAGAGTTTAGCAATACACATTCCATGTGGGTGCTCAGAAAAAAGAGAGTCTCAAATAGTTGTTACCTACACAGTTCAGCCAAATGATACACCAACAATGATTGCTAATCTGCTGAATTCTACACTGGCTGACATGAAGAGCATGAATAAGGTGGAGCTGTTGGGATATGCCAACGGAGAAGATGACCTCTATTTGGTGTATGAGTACGTTCCAAATGGATCTCTTAATGATCATCTTCACAATCCATTACTCAAAGGGAACCAGGCTCTTTCATGGAGTGCTAGGGTTCAAATTGCACTGGATGCTGCAAAAGGACTTGAATATATACATGATTACACAAAAGCACGATATGTGCACCGTGACGTAAAGACTAGCAATATTCTAATTGATGACAAGTTCAGAGCAAAGGTGGGAGATTTTGGACTTGCAAAGCTGGTAGATCGAACCGATGATGAAAATTTTATAGCAACTAGACTTGTAGGAACCCCAGGCTACCTTCCACCAGAATCTCTGAAGGAGCTTCAGGTGACTCCAAAAACCGACGTGTTTGCGTTTGGAGTGGTTAATGAAATATTCCAAGATGATGACCCAGAGACTGCTTTAGAAGATGCCATAGATAAGAATCTTGAAGCTAGCTATCCAATGGAAGATGTCTACAAGATGGCAGAAATAGCTGAGTGGTGCTTGCAAGAAGATCCAATGCAAAGGCCAGAAATGAGGGATATCATTGGGGCATTGTCACAGATTGTGATGTCCTCCACAGAGTGGGAAGCATCCCTGTGTGGAAACAGCCAAGTCTTCAGTGGATTGTTTAGTGGAAGATGA 1254 0.4123 MVSFTHLSFLFFPLLTTSFVRVCASEENSIKTTNLSPLNCSSNIRKCNASLYHISQNLTIEQIATFYSVISSQITPILHGTKQLDYLITVPCSCKNTTNLSGYFHDTTYKVRPHDTFQNISNLIFSGQAWPVNNSTTTLLHPNESLAIHIPCGCSEKRESQIVVTYTVQPNDTPTMIANLLNSTLADMKSMNKVELLGYANGEDDLYLVYEYVPNGSLNDHLHNPLLKGNQALSWSARVQIALDAAKGLEYIHDYTKARYVHRDVKTSNILIDDKFRAKVGDFGLAKLVDRTDDENFIATRLVGTPGYLPPESLKELQVTPKTDVFAFGVVNEIFQDDDPETALEDAIDKNLEASYPMEDVYKMAEIAEWCLQEDPMQRPEMRDIIGALSQIVMSSTEWEASLCGNSQVFSGLFSGR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1594 417 Pfam Protein tyrosine and serine/threonine kinase 183 388 IPR001245 GO:0004672|GO:0006468
Aed7g1594 417 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 17 193 - -
Aed7g1594 417 SUPERFAMILY Protein kinase-like (PK-like) 185 387 IPR011009 -
Aed7g1594 417 SMART serkin_6 146 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1594 417 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 192 331 IPR044812 GO:0019199|GO:0045087
Aed7g1594 417 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 330 417 IPR044812 GO:0019199|GO:0045087
Aed7g1594 417 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 192 331 - -
Aed7g1594 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Aed7g1594 417 ProSiteProfiles Protein kinase domain profile. 118 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1594 417 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 330 417 - -
Aed7g1594 417 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 17 193 IPR044812 GO:0019199|GO:0045087
Aed7g1594 417 Gene3D Transferase(Phosphotransferase) domain 1 166 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1594 Aed-Chr7 19021594 19026990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1594 176 417 Receptor kinase-like Gene Family AT1G51940 45.745 1.79e-75 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed7g1594 PK_Tyr_Ser-Thr 3.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1594 - - gmx:100791718 429.098