Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1587 ATGGCTGCTGCTGCTACAGTCGTAGGGAGCGCAACAACGAACACGAACACGAACTCGGGTGTGGAGTGGCACGTGCGGCCTCCAAACCCTAAGAACCCAATCGTCTTCTTCGATGTAACCATCGGTAATATTCCCGCCGGTCGAATCAAGATGGAGCTCTTCGCCGATATCGCCCCCAAAACCGCCGAGAATTTCAGGCAATTCTGCACTGGGGAGTACAGTGGATGTGTTTCCATCTATGGACTCAAGTTTGATGATGAAAACTTTACTGCCAAACACACTGGCCCCGGCCTTCTGTCAATGGCAAATAGTGGACCAGGTACCAATGGTTGTCAGTTCTTTATAACATGTGCAAAATGTGACTGGCTTGACAACAAGCATGTTGTTTTTGGGAGAGTGCTTGGAGATGGTCTTTTGGTTGTCAGGAAGATTGAGAACGTGGCAACCGGACCCAATAACCGACCAAAATTAGCTTGTGTCATTGCTGAATGTGGTGAAATGTAA 504 0.4841 MAAAATVVGSATTNTNTNSGVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYSGCVSIYGLKFDDENFTAKHTGPGLLSMANSGPGTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1587 167 MobiDBLite consensus disorder prediction 1 25 - -
Aed7g1587 167 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 74 167 - -
Aed7g1587 167 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 37 76 IPR002130 GO:0000413|GO:0003755
Aed7g1587 167 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 83 165 IPR002130 GO:0000413|GO:0003755
Aed7g1587 167 MobiDBLite consensus disorder prediction 7 23 - -
Aed7g1587 167 Gene3D - 22 73 IPR029000 -
Aed7g1587 167 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 29 73 - -
Aed7g1587 167 SUPERFAMILY Cyclophilin-like 23 167 IPR029000 -
Aed7g1587 167 Gene3D - 74 167 IPR029000 -
Aed7g1587 167 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H 74 167 - -
Aed7g1587 167 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H 29 73 - -
Aed7g1587 167 PIRSF Peptidylpro_ismrse 70 167 IPR024936 GO:0003755
Aed7g1587 167 PIRSF Peptidylpro_ismrse 8 77 IPR024936 GO:0003755
Aed7g1587 167 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 36 166 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1587 Aed-Chr7 18927742 18932490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1587 2 164 U-box Gene Family AT5G67530 34.574 3.17e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1587 K09567 - gmx:100305521 300.441