Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1584 ATGGGTCGTCGTAAGATTGAAATTGCTGCGGTGAAAGACCCTAATACGAGGCAAGTGACGTTTTCGAAGCGTCGAACGGGCTTATTCAAAAAAGCGAATGAGTTATCTATTTTGTGCAGAGCAGAGATCGCTATTGTGGTGTTCTCTATTGGAAACAAACCTTACTCTTTTGGGCACCCAAGTGTGGAAGCTGTTGCGGCAAAATTTCTTGATCAAGAATGTTCAAATAGTGATGATGATCATGCCCTAGTTGGTGGTGATGTTGACATAAATAGGTTGAATCAACAATTGGTTGATCTTCAGGCGCAAATGCTCGAGGAAGATAAGAAGGGTGCAAATCATGATGAAATGCTGAAACAACATGAAGTGACTCAACTCTCTCAACATGAATTGCAACGTTCGTGCTTGGAACTCCAACGTAAGGTGAAGGACTATGTTGATGCAATTGAGGTGTCGGAGTGCAGTTAA 468 0.4231 MGRRKIEIAAVKDPNTRQVTFSKRRTGLFKKANELSILCRAEIAIVVFSIGNKPYSFGHPSVEAVAAKFLDQECSNSDDDHALVGGDVDINRLNQQLVDLQAQMLEEDKKGANHDEMLKQHEVTQLSQHELQRSCLELQRKVKDYVDAIEVSECS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1584 155 SUPERFAMILY SRF-like 1 73 IPR036879 GO:0003677|GO:0046983
Aed7g1584 155 Gene3D - 14 81 IPR036879 GO:0003677|GO:0046983
Aed7g1584 155 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 12 57 IPR002100 GO:0003677|GO:0046983
Aed7g1584 155 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL29 2 153 - -
Aed7g1584 155 Coils Coil 90 110 - -
Aed7g1584 155 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aed7g1584 155 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Aed7g1584 155 PANTHER MADS BOX PROTEIN 2 153 - -
Aed7g1584 155 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aed7g1584 155 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aed7g1584 155 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1584 Aed-Chr7 18882874 18883671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1584 1 118 Type I MADS-box Gene Family AT2G34440 47.899 2.93e-32 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aed7g1584 SRF-TF 6.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1584 - - gmx:100789068 227.639