Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1577 ATGGAAGACGCTCTCCTTCGTCTCAACGGAATGGCCCCCGTTCAACAAGAACCCGACACCGCCGCCGCCGCCTCCGACCACCACCCCAAGAAGGGGGCCACCAAGCGCTCCCTGCGCGACACCGCCAACTCCGGCGCCTCTTCTGCCATGCGCTACCGCGGCGTCCGGCGCCGCCCCTGGGGCCGCTACGCCGCCGAGATCCGCGACCCCCAGTCGAAGGAGCGGCGCTGGCTCGGCACCTTCGACACGGCGGAGGAGGCCGCGTGCGCCTACGACTGCGCCGCCCGCGCCATGCGCGGCGCCAAGGCCCGCACCAACTTCGTCTACCCCGATGCCGACGATCCGCACCACCTCTTCCAACCCTACAACTTCCCCAAACACTGCCACGTCACCTCCAGGTTCGTTCCGAACCATAATTTAACCACTGACTTCAACGCAAGTTCCCACACCAACGCTTCTTCTTCTCTCAACATGGTTCTCTTTCGTGACTTTCTCAATCTCAACTCTTCTTCTTCTCACCACTTTCATAACAACAATAATAATAATAACAATAATGTTAAGTCTGCCACCACTGGTTATGTAAACCCTTCCTCTTCTTCTGCTTCCACCACTACCTGTTTCCAAGGTTGTTGCTTTAGCAACACTAACAACTCCAACGGCACCCTTAATCCTGGAACAACGGAAGTTGTTGAACCTATTAACGAAGAGTACTCAGAGTTCTTCCCGCGAGAGTCTTCGGATTCTGGCTTGTTGGAAGAGATCGTCCACAAGTTCCTGCCAAAATCAAAGCCCAAGAACGAAACTTTGTCCGTTCCCACTGAGTCGCTTCCTCAACCTAAATTCGAACTCAAGACTGTTTCTTCTGCAGCAAGGGATTATCACTATGCTGACCCTAGAATGAGGGTTCCGAAGGTTGAAGCTTTTGGTGTCCCATATGAATATTCTTCTCCCATGCAGCAATTTGAAGCTCTTCATCATCATGGCTATAATAACACCATGCAGGGTGTGTCCATGGAGAGAGAGAACCACTTCATGATGAACCATATTGCTGCAGGATGCTCCAGCATGGAAGATTTTCTTCAGTATCCAGAGCTTTTTAGTTCCCTTGCAGCCAGGATGCAAAATGCGTAA 1131 0.5287 MEDALLRLNGMAPVQQEPDTAAAASDHHPKKGATKRSLRDTANSGASSAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGAKARTNFVYPDADDPHHLFQPYNFPKHCHVTSRFVPNHNLTTDFNASSHTNASSSLNMVLFRDFLNLNSSSSHHFHNNNNNNNNNVKSATTGYVNPSSSSASTTTCFQGCCFSNTNNSNGTLNPGTTEVVEPINEEYSEFFPRESSDSGLLEEIVHKFLPKSKPKNETLSVPTESLPQPKFELKTVSSAARDYHYADPRMRVPKVEAFGVPYEYSSPMQQFEALHHHGYNNTMQGVSMERENHFMMNHIAAGCSSMEDFLQYPELFSSLAARMQNA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1577 376 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 376 - -
Aed7g1577 376 MobiDBLite consensus disorder prediction 1 51 - -
Aed7g1577 376 Pfam AP2 domain 51 100 IPR001471 GO:0003700|GO:0006355
Aed7g1577 376 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Aed7g1577 376 MobiDBLite consensus disorder prediction 23 37 - -
Aed7g1577 376 SUPERFAMILY DNA-binding domain 51 108 IPR016177 GO:0003677
Aed7g1577 376 CDD AP2 51 107 IPR001471 GO:0003700|GO:0006355
Aed7g1577 376 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Aed7g1577 376 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Aed7g1577 376 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Aed7g1577 376 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 1 376 - -
Aed7g1577 376 Gene3D AP2/ERF domain 50 109 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1577 Aed-Chr7 18762250 18763380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1577 1 275 AP2-EREBP Transcription Factor Family AT1G24590 38.542 2.69e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed7g1577 AP2 5.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1577 - - gmx:102661952 466.463