Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1563 ATGGAATTCCAAGAGCATGTTGTGCAAGCTGAGCGTGTGATGTCCGCAGCGACAGTGGCTGTGGCGGGTTACCCCGAGTTCAAAATGGAGTCCAATCACCGCGGCGAGGAGGAGCCAGTGTTGGAGGCGGTGCCGCTGCTGGTGCCGGTGCAGATTCCGATTTCTCCGGTGGAATCACCACCACCCAATGTTCCACCACCCCGGAACCGCAGAAAGGGAAAGTACCAAGAGTGCAGGAAGAACCACGGCGTGGGAATGGGCGGACTGGTGCTGGACGGCTGCAACGAGTTCCTCCCGGCTGGCAAAGAGGGCACCCTGGAGGGCCTGAAGTGCGCGGCCTGCGACTGCCATCGTAATTTCCACCGCAAGGAGACCAACCAATTTCCGGACCAGAACCAGCAGCCCCAAGGCCAGGAGGGCGGTCACTACCTGGTGCCCTACCACCTCCACCACCCTGCTCCTACCCCGCCGGCCCCGCAGCCATTCGCGGCATACTACCATGCCCCGACGGGGTACCTCCACGTGGCGGGGCAGCCGCACGCCACGTCGGCACTCCCTGCCACGTCAGGAGGTGGGACCCTGAGTCCAGGAGCGATGGTGGAGGACCAGGAGGACGTGTCTGACCCCTCCAGCGGCCCTCTTGTTGGCGGCTCCAGCAGCAACAGCAACAGAAAGCGCTTCAGGACGCGCTTTTCCCAGGAGCAGAAGGACAAAATGCTCTCCTTTGCTGAAAAGCTCGGCTGGAAAATCCAGAAGCACGACGAGAGCGTCGTGCAGCAGTTCTGCTCGGAAACCGGCGTCCAGCGTAATGTTCTGAAAGTCTGGATGCATAATAACAAGCATACCTTGGGGAAGAAGCCCTAG 864 0.6111 MEFQEHVVQAERVMSAATVAVAGYPEFKMESNHRGEEEPVLEAVPLLVPVQIPISPVESPPPNVPPPRNRRKGKYQECRKNHGVGMGGLVLDGCNEFLPAGKEGTLEGLKCAACDCHRNFHRKETNQFPDQNQQPQGQEGGHYLVPYHLHHPAPTPPAPQPFAAYYHAPTGYLHVAGQPHATSALPATSGGGTLSPGAMVEDQEDVSDPSSGPLVGGSSSNSNRKRFRTRFSQEQKDKMLSFAEKLGWKIQKHDESVVQQFCSETGVQRNVLKVWMHNNKHTLGKKP 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1563 287 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 224 280 IPR006455 -
Aed7g1563 287 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 75 124 IPR006456 -
Aed7g1563 287 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 68 286 - -
Aed7g1563 287 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 68 286 - -
Aed7g1563 287 MobiDBLite consensus disorder prediction 183 231 - -
Aed7g1563 287 MobiDBLite consensus disorder prediction 212 226 - -
Aed7g1563 287 Pfam ZF-HD protein dimerisation region 74 125 IPR006456 -
Aed7g1563 287 MobiDBLite consensus disorder prediction 126 158 - -
Aed7g1563 287 SUPERFAMILY Homeodomain-like 210 285 IPR009057 -
Aed7g1563 287 Gene3D - 215 284 - -
Aed7g1563 287 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 74 124 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1563 Aed-Chr7 18489635 18490498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1563 72 283 ZF-HD Transcription Factor Family AT4G24660 49.057 3.43e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aed7g1563 ZF-HD_dimer 1.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1563 - - gmx:100798992 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0253 6 2227441 2228865 Aed7g1563 7 18489635 18490498 PCT