Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1547 ATGGCTGGTGCCACAAATTGGCTTACGTTTTCGTTGACTCCCACCATGGAAATGCAGTTCGCTCCGTACGACAACAACTTTTACGGGTGGACAAATTCGAAGCAGGGTGTGATGGATTCTCCTCAGAGCGAAACGCAGCAACTTCTCGCCGCGGTGCCGAAAATAGAGCATTTTTTCGATAACCAAACCGAAAAAGGTGATTCTTCTTCGCTGACCCAAATTTATGAACATGACACTGTTTACTTCGGGGTGGGCCAGGGCCAGGGTCAGCAAGATCTGAATGCGATTCCTGGATTGCACTCTGCTGCGACCAACTCGGGCTCCGAGGTGGATGACTCAGCCTCCAACAAGACGACTCGGGTTGCACCCACTGAGTCGCTAGGTGCTCACTCGGGCGAGTCTTGCAAAGGAGCTGCTGCTTTGTCGTTATGCAATGATAACAACAACAAGACCATTGCTGCGGTGGCGGTGGCGGTGGGGGTGGGGTTTGACACACCGAAGAAGGTTGCTCATACCTTTGGCCAGCGAACTTCAAAATACAGAGGTGTCACAAGACACCGATGGACGGGAAGATATGAAGCGCATCTGTGGGATAACAGCTGTAGGCGAGAGGGTCAAGTCAGGAAAGGGCGTCAAGGTGGATATGACAAGGAAGATAAGGCTGCAAGGGCTTATGATTTAGCAGCTCTAAAGTACTGGGGACCAATGGCAACCACCAACTTTCCTATTTCCAATTATACAATGGAATTGGAGGAGATGAAACATGTTGGAAAGCAAGAATTTATTGCATCACTGCGAAGGAAGAGTAGTGGTTTTTCAAGGGGAGCTTCTGCTTACAGAGGTGTTACAAGGCATCACCAACAGGGTAGATGGCAAGCAAGAATTGCAACTGAAGAGGAAGCAGCAGAGGCCTACGATGTTGCAGCCATCAAGTTCAGAGGTTCAAGCGCGGTGACCAACTTCGAGATGAGCCGCTACAATGTGGAAGCTATTCGGAACGCCACTCTTCCCATTGGTGGCGTCGCGAAGCGCTTCAAGGTTTCCCCAGAACCGGAGAACAAACCTCTTATCATCAGCGGCGCCAATCACCAACCTCATCAGAACACAATCACCACCAGCAGCATTGATTTCTCGGCCATTCAGCCGGTGTCGACTACTCCCTATGACTCTGCTGCAATCACATATTACCCCCACAACCACCTCTTCCACAATTTCAATCCCACCAGCACCACATCAGAGCCAACTGTGACTAACAATGCAAGCTATGCAACCGCACTCCCGACCCTTCTTCCATCACCGCTGCCTGCACTTCCCGCGTTCTTCATATGGCCTCATCAGAACTATTGA 1347 0.5056 MAGATNWLTFSLTPTMEMQFAPYDNNFYGWTNSKQGVMDSPQSETQQLLAAVPKIEHFFDNQTEKGDSSSLTQIYEHDTVYFGVGQGQGQQDLNAIPGLHSAATNSGSEVDDSASNKTTRVAPTESLGAHSGESCKGAAALSLCNDNNNKTIAAVAVAVGVGFDTPKKVAHTFGQRTSKYRGVTRHRWTGRYEAHLWDNSCRREGQVRKGRQGGYDKEDKAARAYDLAALKYWGPMATTNFPISNYTMELEEMKHVGKQEFIASLRRKSSGFSRGASAYRGVTRHHQQGRWQARIATEEEAAEAYDVAAIKFRGSSAVTNFEMSRYNVEAIRNATLPIGGVAKRFKVSPEPENKPLIISGANHQPHQNTITTSSIDFSAIQPVSTTPYDSAAITYYPHNHLFHNFNPTSTTSEPTVTNNASYATALPTLLPSPLPALPAFFIWPHQNY 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1547 448 SMART rav1_2 179 248 IPR001471 GO:0003700|GO:0006355
Aed7g1547 448 SMART rav1_2 278 328 IPR001471 GO:0003700|GO:0006355
Aed7g1547 448 SUPERFAMILY DNA-binding domain 178 244 IPR016177 GO:0003677
Aed7g1547 448 SUPERFAMILY DNA-binding domain 277 324 IPR016177 GO:0003677
Aed7g1547 448 Pfam AP2 domain 178 234 IPR001471 GO:0003700|GO:0006355
Aed7g1547 448 ProSiteProfiles AP2/ERF domain profile. 179 242 IPR001471 GO:0003700|GO:0006355
Aed7g1547 448 Gene3D AP2/ERF domain 278 324 IPR036955 GO:0003700|GO:0006355
Aed7g1547 448 Gene3D AP2/ERF domain 178 244 IPR036955 GO:0003700|GO:0006355
Aed7g1547 448 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 38 445 - -
Aed7g1547 448 ProSiteProfiles AP2/ERF domain profile. 254 322 IPR001471 GO:0003700|GO:0006355
Aed7g1547 448 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 38 445 - -
Aed7g1547 448 CDD AP2 178 244 IPR001471 GO:0003700|GO:0006355
Aed7g1547 448 PRINTS Ethylene responsive element binding protein signature 180 191 IPR001471 GO:0003700|GO:0006355
Aed7g1547 448 PRINTS Ethylene responsive element binding protein signature 304 324 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1547 Aed-Chr7 18169121 18176792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1547 41 448 AP2-EREBP Transcription Factor Family AT5G10510 44.094 7.96e-107 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed7g1547 AP2 3.3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1547 K09285 - gmx:100795280 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0231 6 2007719 2013160 Aed7g1547 7 18169121 18176792 PCT