Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1543 ATGGAGAAAATAGATTGGAGGAGCAAGAAGGAGGAAATGAAAGAAAAGAAAAAGGGGCGAAAGCTTGATCTAACGTCGATGATGGGGAGCCTGCCAAACCTACAGAACATGCAGAACCACTCCAAGAAAGAGGCTTCTGTGTGCTGTGGCAGTGGTTGTGGTGGTGACGATGATGACGTATTGGGGTCGCCGAGGGATGTGTTTGGGAATCCGGGGATGGATTCGGACAACACAGCGAGCAGCAACTACGAAGGCGACGGGCCTGGGTCGCCGGGCCTGGGCCAGAAGGGGCAGGCCCAGCAGTGGAAGACTATAATCGACGTGCTGCGGTTCAAGAACGTGAGGAGATTCTCGACGATTCCTATGCTCACCGCCAGCTACGAGATCTCGAGGAAGAGCCTCAGGAACAAGCTGGCGCTGTACAAAGGATGCTTACCGGATGGTCAACTTGTAGCTGTAAAGAGGTTAATGAGGAGTGAAAAGGAAGCTGCTGGTGATTTCTTGTCAGAGCTTGGAATCATTGCTCACATTAACCATCCCAATGCAACTCGCTTGGTTGGGTTTGGGATTTCAGATTTTGGATTGGCAAAGTGGCTCCCAGATAAGTATTTGGCTCCAGAGTACTTCATGCATGGAATTGTGGATGAGAAGACTGATGTTTTTGCATTTGGGGTTTTGTTGTTGGAGCTGATAACAGGACGTCGTGCAGTTGATTCAAATAGTAGGGAAAGTCTTGTGATCTGGGCGAAGCCACGGCTGGATGCAGAGTTGATGGAAGGAATGGTGGACCCCAGATTAGAAGGTAAATATGATGTCGCAGAAATGAAGTGTGCCATGGCAACGGCTTCCATGTGTATCCATCACATGTCCTCTAAGCGTCCATACATGGATCAGGTTGTGCAGCTACTGAAAGGGGAAGAGGTGCTTGAACTCAATCAAAGTTCATCAACCCCAAGATCACTCTTGATAGATGCATGTGACCTTGAAGATTACACTTGCTCTAATTATTTGAACAACATCAATCGCCACAAGCAGTTACTCTTGGAGTGA 1050 0.4848 MEKIDWRSKKEEMKEKKKGRKLDLTSMMGSLPNLQNMQNHSKKEASVCCGSGCGGDDDDVLGSPRDVFGNPGMDSDNTASSNYEGDGPGSPGLGQKGQAQQWKTIIDVLRFKNVRRFSTIPMLTASYEISRKSLRNKLALYKGCLPDGQLVAVKRLMRSEKEAAGDFLSELGIIAHINHPNATRLVGFGISDFGLAKWLPDKYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPRLDAELMEGMVDPRLEGKYDVAEMKCAMATASMCIHHMSSKRPYMDQVVQLLKGEEVLELNQSSSTPRSLLIDACDLEDYTCSNYLNNINRHKQLLLE 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1543 349 Gene3D Phosphorylase Kinase; domain 1 97 189 - -
Aed7g1543 349 PANTHER OS08G0249100 PROTEIN 140 190 - -
Aed7g1543 349 PANTHER OS08G0249100 PROTEIN 1 129 - -
Aed7g1543 349 MobiDBLite consensus disorder prediction 1 23 - -
Aed7g1543 349 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 190 349 - -
Aed7g1543 349 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 1 129 - -
Aed7g1543 349 MobiDBLite consensus disorder prediction 1 24 - -
Aed7g1543 349 MobiDBLite consensus disorder prediction 60 97 - -
Aed7g1543 349 Pfam Protein tyrosine and serine/threonine kinase 199 302 IPR001245 GO:0004672|GO:0006468
Aed7g1543 349 SUPERFAMILY Protein kinase-like (PK-like) 141 319 IPR011009 -
Aed7g1543 349 PANTHER OS08G0249100 PROTEIN 190 349 - -
Aed7g1543 349 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 140 190 - -
Aed7g1543 349 Gene3D Transferase(Phosphotransferase) domain 1 190 305 - -
Aed7g1543 349 SMART tyrkin_6 132 303 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1543 Aed-Chr7 18057652 18064543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1543 190 299 Trihelix Transcription Factor Family AT1G68690 42.308 1.94e-23 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aed7g1543 PK_Tyr_Ser-Thr 2.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1543 - - gmx:100812793 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0230 6 2001579 2006670 Aed7g1543 7 18057652 18064543 PCT