Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1526 ATGGCTTTCTTCATCTCTGCTTCATACTCTAGTCAAACCCAAAAACAAGCCTCCTTGTTCATATTTATCATCTTCACTTTGTTCCACACAGTACTCTTTATCACCGTAGAGTCAGTTTCCTTCAACTTTTCATCCTTCCAACCAAGCTCAAATAATCCAATAGATTTCCAGGGTGATGCCTTTTCCTCAAACAGAGTTCTTCAGCTCACAAAGAACCAAGTTGACAAAAAATTTACATCCAGCGTTGGCCGAGCCTTGTATAACCAACCAGTGAGGTTGTGGGACAGAAGAACCAACAAGCTCATAAATTTCACAACCCATTTTTCTTTTATCATGAAATTAGTTGACCCAAATCGGTTCGGTGATGGGTTAGCTTTCTTCATTGTACCCTTTGATTCTGTGATCCCGAACAATTCGGCAGGCAAGTACCTTGGCCTATTCAGCAACGAATTCGCATTCGACACGAAGAAAAATCAATTAGTGGCAGTTGAGTTCGACAACTTTGAGAATGAGTGGGATCCAAGCAATGATCATGTAGGGATCGATGTCAATTCAATTCAATCCGTCGCAAATGTGTCTTGGAAGAGCAACATTAAGAACGGGTCGGTCGCTAATGCTTGGATATGGTACAGCTCTACGACCAAAAATCTTTCGATGTTCCTTACTTATGCTAACAATCCAACCTTTAATGGCAATTCTAGTCTTTGGTATGTCGTTGATTTGAGAGATGTGTTGCCAGAGTTTGTTAGAATAGGTTTTTCTACTGCAATTGGTTCATGGATTGAAACACACAACATTCTGTCTTGGTCTTTCAATTCAAACCTGTATGAAAATGGGCAAGCTGAGCCAGACAAGTTGGCCCATCACGGGTCGAGTCAAACCGATTCACATTTGAATAAGCCATGA 906 0.4095 MAFFISASYSSQTQKQASLFIFIIFTLFHTVLFITVESVSFNFSSFQPSSNNPIDFQGDAFSSNRVLQLTKNQVDKKFTSSVGRALYNQPVRLWDRRTNKLINFTTHFSFIMKLVDPNRFGDGLAFFIVPFDSVIPNNSAGKYLGLFSNEFAFDTKKNQLVAVEFDNFENEWDPSNDHVGIDVNSIQSVANVSWKSNIKNGSVANAWIWYSSTTKNLSMFLTYANNPTFNGNSSLWYVVDLRDVLPEFVRIGFSTAIGSWIETHNILSWSFNSNLYENGQAEPDKLAHHGSSQTDSHLNKP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1526 301 MobiDBLite consensus disorder prediction 282 301 - -
Aed7g1526 301 CDD lectin_legume_LecRK_Arcelin_ConA 39 275 IPR001220 GO:0030246
Aed7g1526 301 PANTHER LECTIN 12 275 - -
Aed7g1526 301 Gene3D - 36 289 - -
Aed7g1526 301 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 12 275 - -
Aed7g1526 301 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 276 IPR013320 -
Aed7g1526 301 ProSitePatterns Legume lectins alpha-chain signature. 245 254 IPR000985 -
Aed7g1526 301 PIRSF Plant_L_lectin 8 282 IPR016363 GO:0030246
Aed7g1526 301 Pfam Legume lectin domain 39 284 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1526 Aed-Chr7 17647077 17648386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1526 27 275 Receptor kinase-like Gene Family AT5G10530 41.176 4.29e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1526 - - gmx:100777201 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0216 6 1864285 1865130 Aed7g1526 7 17647077 17648386 PCT
Aed7g1526 7 17647077 17648386 Aed6g0218 6 1877279 1878133 PCT