Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1513 ATGGAGCTTTCCCAACTTGGTTTCCTAGAAGAGTTGGTAGCTCCAAGAAGAGACTCATGCAATGCTTTCTCCACTGGCTTCTGTGAGCTACTTCACAACGCTTGGAGCTTTGACTCTTTTCTTCTAGAGAACCCATCATCAAACTCCCCCACATACCCATTTTGTGATGGCTTCACAATGCCATTGCCAGAGCTTCACCACCCTGTGAATAATGATGAGCCTCCTCCACTTCCACTTCTTCCACCATCACTAGTGGATGATGATGCAGAGATTGTGTTTCACAACAACTTTGAAGAAACCAAGATTGTGTGCAAAGTTGAGGAACAAGGCACAGAGATTATTAATCTTAATCCACTATTCAACATTGGAGAGAGAAAACCCAAGTCAAGGAGGCTTGAGGGGCAGCCCTCAAAGAATCTCATGGCTGAGAGGAGGAGAAGAAAGCGTCTCAATGACCGTCTTTCCATGCTCAGGTCAATAGTCCCCAAGATCAGTAAGATGGATAGGACCTCTATTCTTGGTGATACCATAGATTACATGAAGGAGCTTTTGGAAAGGATTGGGAAATTGCAAGAGGGGGAAGAGGGAACAGCTCAGATGAATCTGTTGGGTATTTCTAAGGAACAACAACTCAAGCCAAATGAAGCAATAGTAAGAAACTCTCCTAAGTTTGATGCTGAGAGGAGAGTGCAGGACACCAGGATCAGCATCTGCTGTGCCACAAAGCCTGGATTGCTACTATCAACTGTGAATACCTTAGGAGCATTAGGCCTTGAGATTCAGCAATGTGTTATAAGTAGCTTCAATGACTTCTCAATGAAAGCATCTTGTTCTGAGGTAGCTGAACAGAGAAATTGCATTAGCCCTGAAGAGATAAAACAAGCACTTTTCAGAAATGCTGGCTTTGGTGGGAAATTCGGGATTGTTTTGGAAGTTACGGCTCAAAGGAAAGTCAAATGGGGTGTTGGGCTATGCAGCAGCAACAACAAATAA 993 0.4391 MELSQLGFLEELVAPRRDSCNAFSTGFCELLHNAWSFDSFLLENPSSNSPTYPFCDGFTMPLPELHHPVNNDEPPPLPLLPPSLVDDDAEIVFHNNFEETKIVCKVEEQGTEIINLNPLFNIGERKPKSRRLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEGEEGTAQMNLLGISKEQQLKPNEAIVRNSPKFDAERRVQDTRISICCATKPGLLLSTVNTLGALGLEIQQCVISSFNDFSMKASCSEVAEQRNCISPEEIKQALFRNAGFGGKFGIVLEVTAQRKVKWGVGLCSSNNK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1513 330 SMART finulus 140 189 IPR011598 GO:0046983
Aed7g1513 330 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 305 - -
Aed7g1513 330 PANTHER TRANSCRIPTION FACTOR BHLH61-RELATED 2 305 - -
Aed7g1513 330 Pfam Helix-loop-helix DNA-binding domain 140 183 IPR011598 GO:0046983
Aed7g1513 330 CDD ACT_UUR-ACR-like 233 273 - -
Aed7g1513 330 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 183 IPR011598 GO:0046983
Aed7g1513 330 Gene3D - 129 193 IPR036638 GO:0046983
Aed7g1513 330 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 196 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1513 Aed-Chr7 17398258 17401915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1513 90 305 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 55.556 8.22e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed7g1513 HLH 6.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1513 - - gmx:100790319 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0202 6 1761308 1763034 Aed7g1513 7 17398258 17401915 PCT