Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1504 ATGTCTCCGCCACTGCTGGTTACCGAAGATGAAGGGCAGAGCAATGCCTCAATGGTGGTAGCTTCTGCATCTTCGCCAACTTTGGAATGTTTCTCCCTACATGAGGCTCGATTGAAAGAACGCAATTACCTGGGATTGTCGGATTGCTCCTCGGTGGACAGTTCTACTGTCCCTAGCTTGTCTGATAAGAAAAAGAACAATCTGAATTTGAAGGCTACTGAGCTGAGGCTCGGCCTTCCGGGATCCCAGTCGCCAGAAAGGGATCATCCAGATGTTTTCTCGTTGAGCTCAACAAAACTCGATGAGAAACCGCTGTTCCCTTTGCTGCCTACAAAGGATGGAATCTGCTCGTTGTCTCAGAAAACCGTGGTCTCGGGCAACAAGAGAGGTTTTGCTGACACAATGGACCCTGAGTTTCCTGGCAATGCAGGGATAAACATGATGCTATCACCTAAACCTTCTGGAGTTCAGCCAACCACAGTGAAAGAAATACCAAGCAAGGTGTTACAAGAACGTCCTTCTGCGGCAAATGGAACTGTTCATATCTATGATAGGGCACAAGTTGTTGGTTGGCCTCCTATAAGATCATTTAGGAAAAACTCATTGGCCACCACATCAAAAAACAATGATGAAGTAGATGGAAAACCGGGTGCAGCTGCCGCACTCTTTGTGAAGGTCAGCATGGACGGTGCTCCCTATCTGAGGAAGGTAGATCTAAGAAATTACACAACATACCAGGATCTGTCTTCTGCCCTCGAGAAGATGTTCAGCTGTTTCACTCTAGGTCAATGTGGTTCCCATGGAGCTCCGGGAAGAGAAATGTTGAGTGAGAGCAAGCTGAAGGACCTCTTGCATGGTTCAGAATATGTACTCACTTATGAAGATAAAGATGGTGACTGGATGCTTGTTGGAGATGTACCATGGGATATGTTTACTGACACATGCAAAAGACTGAAAATCATGAAGGGTTCTGATGCCATTGGCTTAGGTATCTCCCAGGGCAATGGAAAAATCCAGGAGCAGGAGCTAGTTGGTATTGGAACTGTTGATTGCGTTTTGTTTATTAAGGTGAAGTTGCTGGATGTTGTTGTCTATGATTACAAGTCCCAGAAGGGTGTGGAAAGAGAACTCATGGTTTTGATGGTTAACTGCCATTCTAGATGTTGTTGTCTATGA 1176 0.4566 MSPPLLVTEDEGQSNASMVVASASSPTLECFSLHEARLKERNYLGLSDCSSVDSSTVPSLSDKKKNNLNLKATELRLGLPGSQSPERDHPDVFSLSSTKLDEKPLFPLLPTKDGICSLSQKTVVSGNKRGFADTMDPEFPGNAGINMMLSPKPSGVQPTTVKEIPSKVLQERPSAANGTVHIYDRAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGAAAALFVKVSMDGAPYLRKVDLRNYTTYQDLSSALEKMFSCFTLGQCGSHGAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWDMFTDTCKRLKIMKGSDAIGLGISQGNGKIQEQELVGIGTVDCVLFIKVKLLDVVVYDYKSQKGVERELMVLMVNCHSRCCCL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1504 391 Gene3D - 217 335 - -
Aed7g1504 391 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 13 334 IPR003311 GO:0005634|GO:0006355
Aed7g1504 391 ProSiteProfiles PB1 domain profile. 221 325 IPR000270 GO:0005515
Aed7g1504 391 PANTHER AUXIN-INDUCED PROTEIN 13 334 - -
Aed7g1504 391 Pfam AUX/IAA family 73 330 IPR033389 -
Aed7g1504 391 SUPERFAMILY CAD & PB1 domains 220 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1504 Aed-Chr7 17244360 17250584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1504 211 320 B3 DNA Binding Superfamily AT4G23980 29.091 5.97e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aed7g1504 AUX_IAA 2e-86 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1504 K14484 - gmx:100500373 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0199 6 1738251 1742011 Aed7g1504 7 17244360 17250584 PCT