Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1483 CCCACTTGCCACAGTAGCAGCCTTCAATGCTGTTCTGTTTACAGTGAGGGGACAAATGGAAACATTAGTGAGGTCCCATCCTGGTACCCCCCTCACAGTGGATCAGCAGGTTGTTTGCGGAGCTGGAGCCGGTTGCAAGCACAAAGTGCACTTGCTGGCTCCGAAACAGCTTCTGTGGCTGTTAAGTATGGCGGACCCATGGACGTGGCCAGGCATGTTCTCCGGTCAGAAGGGGGCGTGAGAGGTCTTTTCAAAGGCTTGGTTCCTACTATGGGACGAGAGATACCCGGAAACGCTATAATGTTTGGTGTATACGAAGCATTAAAGCAAAAATTTGCAGGAGGCACTGATACTTCTGGCCTAAGTAGAGGCTCTCTGATTGTTGCTGGAGGCTTGGCTGGAGCTTCCTTCTGGTTCATTGTTTACCCAACTGATGTTGTTAAGAGTGTGATTCAAGTAGATGATTACAGAAACCCGAAATTTTCTGGTTCCTTAGATGCATTCAGAAAGATTCGAGCTTCAGAAGGGTTCAAAGGCTTGTATAAGGGTTTTGGTCCTGCAATGGCCCGAAGTGTTCCTGCAAATGCAGCATGCTTCTTGGCATATGAAATGACAAAATCAGCTCTGGGATGA 633 0.4818 PTCHSSSLQCCSVYSEGTNGNISEVPSWYPPHSGSAGCLRSWSRLQAQSALAGSETASVAVKYGGPMDVARHVLRSEGGVRGLFKGLVPTMGREIPGNAIMFGVYEALKQKFAGGTDTSGLSRGSLIVAGGLAGASFWFIVYPTDVVKSVIQVDDYRNPKFSGSLDAFRKIRASEGFKGLYKGFGPAMARSVPANAACFLAYEMTKSALG 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1483 210 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 111 IPR018108 -
Aed7g1483 210 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 208 IPR018108 -
Aed7g1483 210 SUPERFAMILY Mitochondrial carrier 43 203 IPR023395 -
Aed7g1483 210 Pfam Mitochondrial carrier protein 127 209 IPR018108 -
Aed7g1483 210 Pfam Mitochondrial carrier protein 44 113 IPR018108 -
Aed7g1483 210 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 43 210 - -
Aed7g1483 210 Gene3D Mitochondrial carrier domain 43 210 IPR023395 -
Aed7g1483 210 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 43 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1483 Aed-Chr7 16563500 16565421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1483 65 209 Antiporters AT1G79900 36.301 2.50e-24 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1483 K15109 - gmx:100787304 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1483 7 16563500 16565421 Aed7g1483 7 16563500 16565421 ECH