Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1477 CACAGCCATAGAAGACAAGCTTCAAAAGGGAGTACCATTTTGCATAGAGACTCTTTAAAGAGTTGGGACAAGATTGAAATAGCAATAAACATTGCCTATGCATGCAACTTGATAAACAATGAGATGAAGCAATTTGTTATTAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGACAGGGGTGACCAAGTGGAAATTGCACGGTTTATCAAAGATGAAGTGAAAAGAGAGTTGAAGAAATGCCTCGAGGAAGCACAAAGCTATTTTCACTCCCTATTTGGACCAAAATTAGCCCTTGTAATTGATGGAAAATGTTTAATGTATGCATTAGATCCAAGTTTAAGAGTGATGCTGCTAAATCTAAGTTTGAATTGTCACTTTGTTGTTTGCTGCCGAGTTTCTCCTTTACAGATAGCACAGGTAAAGCTCGTATTTTGTGTCAATAACTTATTTGACTTATTTCCCCTTTACGCATTTTATTTCTAA 486 0.3601 HSHRRQASKGSTILHRDSLKSWDKIEIAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIKDEVKRELKKCLEEAQSYFHSLFGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHFVVCCRVSPLQIAQVKLVFCVNNLFDLFPLYAFYF 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1477 161 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 17 142 - -
Aed7g1477 161 Gene3D - 14 147 IPR023214 -
Aed7g1477 161 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 17 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1477 Aed-Chr7 16303530 16304242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1477 14 141 Primary Pumps ATPases AT1G59820 79.545 4.19e-64 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1477 K14802 - gmx:100815547 219.55