Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1474 ATGACGGAGTACAGGATGAATCTCTGGACCGACGACAACTCCTCCGTCATGGAGGCCTTCATGAGCTCCTCTGACCTCTCCTCCCTCTGGCTCCCCACGCCGCAGTCCGCCGCCTCCACCACCACTCCGGCCGAAACCATCCGAGCCCCTCCCCCGCCGCTTCAATCCCACTCCCTCCTCAACCAGGACACCCTCCAGCAGCGCCTCCAGACGCTAATAGAAGGCGCCCGAGAGAACTGGACCTACGCTATCTTCTGGCAGTCTTCCTACGACTACTCCTCCGGCTCTTCCCTTCTCGGCTGGGGAGACGGCTACTACAAAGGCGAGGAGGACAAAACCAAAGCCAAAGACAAAGCTCATGCCCCCAAACCTATGTCGTCAGCGGAGCAGGACCACCGCAAGAAGGTCCTCCGCGAACTCAATTCCTTAATCTCCGGCTCCTCCGCTTCCCCCGACGACGTCGATGAGGAAGTCACCGACACCGAGTGGTTCTTTCTAGTGTCCATGACTCAGTCTTTTGTTAATGGGAACGGCCTCCCGGGCCAGGCTTTCTTCAATTCGAGCCCGGTTTGGGTCGCCGGGCCCGACCGGTTGTCTGAATCGGCCTGCGAACGGGCCCGCCAGGGGCAGGTCTTCGGGCTCCAGACTCTGGTCTGTATACCATCCGCTAACGGCGTCGTTGAGCTCGCCTCCACGGAGGTCATTTTCCAGAACCCTGATCTGATGAACAAGGTGCGCGATTTGTTCACCTTCAACAACAATAACAACATCAACCCTGAAACGGGTTCGTGGGCGTTGAATTGCGTCGCCACCACCGATCAGGGCGAGAACGACCCCTCCTCGCTCTGGCTCAACGCTTCTTCCTCCGTCGAAATCAGAGACTCCTCCACCGTCGCTGCGCCGCCGAATGCGACGGCTAACAAGACGCTGCAGTTCGAAACACCTGGTTCAAGTACCCTAACCGAAACCCCTAGCGCTGCTGCTGCTTCTTCTGCTGTTCATCTACCCAACGCTAAGAGCCAGGGTTTATTCCCGAAGGAATTGAACTTTTCAAATTCAATGAAACCTGAATCCGGTGAAATTTTGAGCTTCGGAGAGAGCAAGAAGAGCTCTTACAACGGGAGTTTCTTCCCCGGTGTTGCTGCAGTTGAGGAGAACAACAACAAGAAGAAGAGGTCAACGGTTTCTCGGAGCAGCATTGACGACGGAATGTTGTCCTTCACTTCTGGCGTGATCCCACCGGCTGCAAATATAAAATCTGGCACCGGCACCGGAACCGGTGGTGGTGATTCCGATCACTCGGATCTGGAAGCTTCCGTGGTGAAACAGGCCGACAGCAGAGTGGCGGAACAGGAGAAACGACCCCGGAAGAGAGGGCGGAAGCCGGCGAACGGAAGAGAGGAGCCGCTGAATCACGTGGAAGCAGAGAGGCAGAGGAGAGAAAAACTGAATCAAAGATTCTACGCTCTACGAGCTGTGGTTCCCAACGTCTCTAAGATGGACAAGGCGTCGCTCTTGGGCGACGCCATATCGTACATTAACGAGCTGAAGTCGAAGCTCAATGGTCTGGAATCGGAGAAAGGAGAATTGGAGAAACAATTGGATTCGGCCAAGAATGAACTTGAAATAGCAACCCAAAACCCTACTCCACCATCGCCACCACCACCTGCGGCTGAGAATGAAGCAAAGAAAACAACAACAACAACAACAACAAGCACGCTCGTTGATTTGGAAATAGAGGTGAAGATCATCGGTTGGGATGCGATGATAAGGATCCAATGCAGCAAGAAGAACCACCCTGCAGCGAAGTTGATGGCAGCGTTGAAGGACCTGGACCTGGAAGTGCATCATGCCAGCGTGTCCGTGGTGAATGATTTAATGATCCAACAAGCAACGGTCAACATGGGAAGCAAGTTTTACACGCAGGAACAGCTCCACTCGGCACTCTCGTCCAAAGTTGCCGATGAACAACGATAG 1977 0.5463 MTEYRMNLWTDDNSSVMEAFMSSSDLSSLWLPTPQSAASTTTPAETIRAPPPPLQSHSLLNQDTLQQRLQTLIEGARENWTYAIFWQSSYDYSSGSSLLGWGDGYYKGEEDKTKAKDKAHAPKPMSSAEQDHRKKVLRELNSLISGSSASPDDVDEEVTDTEWFFLVSMTQSFVNGNGLPGQAFFNSSPVWVAGPDRLSESACERARQGQVFGLQTLVCIPSANGVVELASTEVIFQNPDLMNKVRDLFTFNNNNNINPETGSWALNCVATTDQGENDPSSLWLNASSSVEIRDSSTVAAPPNATANKTLQFETPGSSTLTETPSAAAASSAVHLPNAKSQGLFPKELNFSNSMKPESGEILSFGESKKSSYNGSFFPGVAAVEENNNKKKRSTVSRSSIDDGMLSFTSGVIPPAANIKSGTGTGTGGGDSDHSDLEASVVKQADSRVAEQEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLNGLESEKGELEKQLDSAKNELEIATQNPTPPSPPPPAAENEAKKTTTTTTTSTLVDLEIEVKIIGWDAMIRIQCSKKNHPAAKLMAALKDLDLEVHHASVSVVNDLMIQQATVNMGSKFYTQEQLHSALSSKVADEQR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1474 658 MobiDBLite consensus disorder prediction 113 132 - -
Aed7g1474 658 MobiDBLite consensus disorder prediction 411 477 - -
Aed7g1474 658 PANTHER MYC 9 655 IPR045084 GO:0003700|GO:0006355
Aed7g1474 658 CDD bHLH_AtAIB_like 464 540 - -
Aed7g1474 658 MobiDBLite consensus disorder prediction 413 429 - -
Aed7g1474 658 MobiDBLite consensus disorder prediction 435 477 - -
Aed7g1474 658 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 65 249 IPR025610 -
Aed7g1474 658 Gene3D - 459 546 IPR036638 GO:0046983
Aed7g1474 658 PANTHER TRANSCRIPTION FACTOR MYC2 9 655 - -
Aed7g1474 658 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 470 535 IPR036638 GO:0046983
Aed7g1474 658 Pfam Helix-loop-helix DNA-binding domain 471 516 IPR011598 GO:0046983
Aed7g1474 658 MobiDBLite consensus disorder prediction 33 56 - -
Aed7g1474 658 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 467 516 IPR011598 GO:0046983
Aed7g1474 658 MobiDBLite consensus disorder prediction 544 570 - -
Aed7g1474 658 SMART finulus 473 522 IPR011598 GO:0046983
Aed7g1474 658 Coils Coil 513 547 - -
Aed7g1474 658 MobiDBLite consensus disorder prediction 297 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1474 Aed-Chr7 16194415 16196391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1474 1 654 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 55.804 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed7g1474 bHLH-MYC_N 6.5e-54 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1474 K13422 - gmx:100790854 1001.5