Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1456 ATGTCTTCACGGCCGGGGCACGACACGGCATTATCACCGGCCGCAGCGCCGTACAACACCCCTCCCGCGCTGATAGCCTTCACGCTAGGCGTGCTCGTGGTGTGCTTCGTGGCGTTCAGCATCGTGTACTTGTGCAAGTACTGTTTCTCAAGCGTGATCCACACTTGGGCCTTCCAACGCACCGCTTCAGGTTCCCTACTTCGTTTTTCGCCCCACAGGTCCCCCCCTCGGGGCCTCGACCCTTCGCTGCTCCAGGTCTTCCCCACCTTCCTCTACTCCTCTGTCAAGGACCTCCGTGAGGATCAAACTTACGGCTTCGAATGCGCCATTTGTTTGCTTGAGTTTGAGGACGAAAACATGCTTCGGCTCTTAACCCTCTGCTGCCACGCCTTCCACCAAGACTGCATCGACCTCTGGCTCCAGTCCCATAAGACCTGCCCTGTTTGTCGGCGAAACCTTGATTCGCCCACTGAGGAAGCCCGGCAGTCCGCCAACGTTAACGAAGGTCCCAACGCGGACGTGGTGGTGACATCCACCAGCGGGGAGATACGCATTGATGTAGTAGAAGGGCAAGACCGCAGTAGTGATGATGCTACTGATGGAAATCAAAGACATGAACCTGAGCATCAACATCAACATCATCACGATCACGGGGTTATTCATCAACAAGGGGAACAAACGTTTGCACGGTCGCATTCGACGGGGCACTCGATAGTTTTGATTAGAGGAGAGGGAGATGAGGGAAAGGATGATGAGAAGTACACGTTGAGATTACCAGAGCATGTTTTGAGAGTGAGGCATAATAAGCACAATAGTACGAGGAGTTGTGCGAGTTACAAGGACATGGCTAAGCTTGTTGCTCCTACTGTTGCACCTTGTAGCAATTGTGGCTTTGTTCAACACGTTCCAACTAGCAGCTCCTCCCTTAACCATACTAAAAATAGAGTTCTTTGTCATTGTTCTCGATTCTCGAGTTTTCTCTTCTATTTTTCATGA 996 0.5191 MSSRPGHDTALSPAAAPYNTPPALIAFTLGVLVVCFVAFSIVYLCKYCFSSVIHTWAFQRTASGSLLRFSPHRSPPRGLDPSLLQVFPTFLYSSVKDLREDQTYGFECAICLLEFEDENMLRLLTLCCHAFHQDCIDLWLQSHKTCPVCRRNLDSPTEEARQSANVNEGPNADVVVTSTSGEIRIDVVEGQDRSSDDATDGNQRHEPEHQHQHHHDHGVIHQQGEQTFARSHSTGHSIVLIRGEGDEGKDDEKYTLRLPEHVLRVRHNKHNSTRSCASYKDMAKLVAPTVAPCSNCGFVQHVPTSSSSLNHTKNRVLCHCSRFSSFLFYFS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1456 331 SUPERFAMILY RING/U-box 99 156 - -
Aed7g1456 331 PANTHER RING-H2 FINGER PROTEIN ATL29 12 284 - -
Aed7g1456 331 MobiDBLite consensus disorder prediction 185 219 - -
Aed7g1456 331 PANTHER RING FINGER DOMAIN-CONTAINING 12 284 - -
Aed7g1456 331 SMART ring_2 108 149 IPR001841 -
Aed7g1456 331 Pfam Ring finger domain 107 150 IPR001841 -
Aed7g1456 331 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Aed7g1456 331 MobiDBLite consensus disorder prediction 186 219 - -
Aed7g1456 331 CDD RING-H2_PA-TM-RING 107 150 - -
Aed7g1456 331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 156 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1456 Aed-Chr7 15165777 15166772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1456 22 264 Rapid Response to Elicitors AT2G35000 35.887 6.44e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1456 - - gmx:100815505 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0176 6 1544459 1545373 Aed7g1456 7 15165777 15166772 PCT