Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1445 ATGAGTGTGTGGTGTGGTCCAAAAATGTACGAAGAAAGTAGTTGCTATGATCCTAATGCAATGCCAATGATGGCAGAGGGAGCAGGAGAAGACTGCTTCCCCCAAATGGTTTCAAAATCAGAGGCAGTTATGTCTGCCACCACACAGACCCACAACACCACATTTGCTTACTCTTCCTATTCCAGCGGTGAAGATGCTGCAAATGCAAATGCTACTTCTTGTTCTTCCTCTACCTTCCCAATGGAAATCATTGCTTGTAGCAACACCTTCAACACCACCCAATTTGTGGAAGAGCTTTATTCTTCTTCCTTTCCTCACTCCACCACCACACTTGAGAATCATCATGATCATCAGCAATTTCCTTATCCCACACCAACACCAGATCTCCTCAACCTTCTCCACTTGCCTGCAGGAGGAGATCATAGCACAAACTGTGTCTCCTCCTATGTGTCCTTGCCCTATGACCCTTACTTGCATCTCAACCTGCAGCAACCTACCCTCAGAGAGTTGCTTCCACACATGCCACCGCCGCCGCCTCCTCTGAGAAACGAATTTCCCTTAGGCGGCGGCGAGGATGGCAACATACAGGGCATTATTGGAAATGGAGGAGTGGTGGACTTCACTCAAGACATTATTGTTGGGAAAAAGAGAGGTGGAAAAAGGACCAAGCAGTTCACCAGCACCACCACCACCGAGAGACAAAGGAGAGTGGATTTGAGTAGTAAATTTGATGCTTTGAAAGACCTCATCCCAAACCCTTCCAAGAGTGATAGAGCATCCGTGGTGGGAGATGCTATAAACTACATCAGAGAGCTTAAGAGGACAGTGGAAGAACTGAAATTGCTGGTGGAGAAGAAGAGGCACGAGAAACAAAGGGTGGCGATGATGATGATGAAGAGGCACAAGGTTGTTGAAACTGAAGGTGGTGACTCCTCCAACCTCGACCACGACCCAGACTACAGTACTGAAAACTTAAGAAGTTCTTGGATACAGAGAAAATCCAAAGACACAGAGGTTGATGTGCGAATTGTTGACAACGAGGTCACGATTAAGCTTGTTCAAAGGAAAAAGATCGATTGCTTGGTGCATGTGTCACACCTTCTGGATCAACTTAACCTCGATCTCCAACATATATGTGAAGGTTCCTCAGTTTATGCGAGTGCCATAGCCAACAAGCTCATTCAGGTCATGGACACAACAAGTTTGGCAGCAGCGTCACTCGCCTAA 1227 0.467 MSVWCGPKMYEESSCYDPNAMPMMAEGAGEDCFPQMVSKSEAVMSATTQTHNTTFAYSSYSSGEDAANANATSCSSSTFPMEIIACSNTFNTTQFVEELYSSSFPHSTTTLENHHDHQQFPYPTPTPDLLNLLHLPAGGDHSTNCVSSYVSLPYDPYLHLNLQQPTLRELLPHMPPPPPPLRNEFPLGGGEDGNIQGIIGNGGVVDFTQDIIVGKKRGGKRTKQFTSTTTTERQRRVDLSSKFDALKDLIPNPSKSDRASVVGDAINYIRELKRTVEELKLLVEKKRHEKQRVAMMMMKRHKVVETEGGDSSNLDHDPDYSTENLRSSWIQRKSKDTEVDVRIVDNEVTIKLVQRKKIDCLVHVSHLLDQLNLDLQHICEGSSVYASAIANKLIQVMDTTSLAAASLA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1445 408 Pfam Helix-loop-helix DNA-binding domain 230 272 IPR011598 GO:0046983
Aed7g1445 408 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 228 296 IPR036638 GO:0046983
Aed7g1445 408 SMART finulus 229 278 IPR011598 GO:0046983
Aed7g1445 408 PANTHER TRANSCRIPTION FACTOR BHLH91 9 402 IPR045895 GO:0006355|GO:0048658
Aed7g1445 408 Coils Coil 269 289 - -
Aed7g1445 408 CDD bHLH_AtMYC1_like 232 288 IPR045896 -
Aed7g1445 408 Gene3D - 215 292 IPR036638 GO:0046983
Aed7g1445 408 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 223 272 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1445 Aed-Chr7 14428637 14430743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1445 9 404 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 35.153 5.69e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed7g1445 HLH 4.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1445 - - gmx:100795938 430.254