Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1443 ATGTTGAGAAGGGGACCTCGAGGTGACAGCGTCGTCAGAGAGAGGGAGGAGTGTGCAATGGAAGGGAAACATAAGGGCTACATGGTGTTTGGAAGGGGCACTCAGAGCGTGGAATTTAGTAGAGAGCCCAACAATCCCTACAACCTCAACACTTTCAAGTACTCCGATAATAATCTATCTATCTCTTTATCGTCCATTCTGTCACCATTCAGGATGCTAGAAAGGATCATTGTGTTGCTAGCAACAACCAAGTCAAAGAAACAAAACAATCCAGCTGCATTGCTTCACAAATCTGTAGCAAATAACTACTATAGGACTGATCTCAAAAGGGCAACTCTGACAAGGTTGAGCATTGTCAATAGGAGCCTCAGAGTTGCAAAGTATGGTGTGAAGAAGAGGAACAAGCAGGCTATGAAAAGTTGGGGAAATTAA 432 0.4375 MLRRGPRGDSVVREREECAMEGKHKGYMVFGRGTQSVEFSREPNNPYNLNTFKYSDNNLSISLSSILSPFRMLERIIVLLATTKSKKQNNPAALLHKSVANNYYRTDLKRATLTRLSIVNRSLRVAKYGVKKRNKQAMKSWGN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1443 143 Gene3D - 23 139 - -
Aed7g1443 143 PANTHER 60S RIBOSOMAL PROTEIN L28 30 139 IPR002672 GO:0003735|GO:0005840|GO:0006412
Aed7g1443 143 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 30 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1443 Aed-Chr7 14301012 14309692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1443 30 137 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 40.476 6.61e-22 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1443 K02903 - gmx:100499963 130.568