Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1437 ATGAACAGAGGGAGAACCAATGCAAGTCACGTTGATGGAGAAGGACCAGGTGACAAAGAAGCCTCACTACAGAGGAGTGAGATAGAGACCTTGGAGAAATGGGCAATAGAAATCCATGACCCAAAAAAAGCAGCTAGAGTGTGGCTAGGAACCTTTGAAATATCAAAGGATGCAACCATTGCATATGACGAAGCAACACTCAAGTTCAAAGGCACTGAAGCTAAGCTCAATTTCCTTGAAAGAGTTCATCAAGATGTTCCTTATATGCAACACCAACACCAATAA 285 0.4246 MNRGRTNASHVDGEGPGDKEASLQRSEIETLEKWAIEIHDPKKAARVWLGTFEISKDATIAYDEATLKFKGTEAKLNFLERVHQDVPYMQHQHQ 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1437 94 SMART rav1_2 33 85 IPR001471 GO:0003700|GO:0006355
Aed7g1437 94 CDD AP2 33 78 IPR001471 GO:0003700|GO:0006355
Aed7g1437 94 MobiDBLite consensus disorder prediction 1 26 - -
Aed7g1437 94 SUPERFAMILY DNA-binding domain 32 79 IPR016177 GO:0003677
Aed7g1437 94 Gene3D AP2/ERF domain 24 80 IPR036955 GO:0003700|GO:0006355
Aed7g1437 94 ProSiteProfiles AP2/ERF domain profile. 19 79 IPR001471 GO:0003700|GO:0006355
Aed7g1437 94 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF113 33 79 - -
Aed7g1437 94 MobiDBLite consensus disorder prediction 12 26 - -
Aed7g1437 94 PANTHER DNA-BINDING DOMAIN 33 79 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1437 Aed-Chr7 14072009 14085162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1437 33 83 AP2-EREBP Transcription Factor Family AT5G13330 74.510 2.88e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1437 - - gmx:100500531 103.605