Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1433 ATGATGGATTCTGTTTTCTCTTTGGATACTCCCACTATCACTAATGCTGCCTCTTCCTCACTCCCACCACCAACCACCCTCTTAGTCCCCAAACCCGAACCTTTCTGGGACTCCCACCACGACGACTTCTCCGACGAACTCGACCTCTACACCGAGTTCAACCGCGTCACCGAGCTGTTCCACTTCGCCTTCGGAGCCACCAACGTTGTCGACCCCTCTTTCGGAGCAGCTGCGGCCCCCAACAACAATGTCGCATTCTCCGAACCCAATCCTCATCCTCCGGACTTGAACGCAGTTGCTGCAGTCCCCCCGGACCCTAATTCGCCGTCCGGAGATGTATCTGGAGCGATCATTCCGGTGCCGGAGCACGACGGCACGGTGGCGGCACCGAGGCGGAAGCAGAGCCGGCAGAAGGAGCTGGTGAGAGTGATGGATCTGTCCCCGAGGGACGAGGCTTATTTGAGAGAGACCGTGAGGAGGACGAGACTCGTATATGACTCGCTAAGAGTGCTGACCTCCATGGAGGAAGAGAAACGAGTCGCCTCAGCGGCGGCGGCGGCGGCGGCAGCAGTGATGGCGGAAGCAACGCCAGTGGAGGGAAGTCCGCCCGTGGAGAGCGGCTCAACTGGCAGAGCACGGCGTCTCCGCGGAGACCTGCGGGCGGCCGGGCTGATGAGAGAGCGTGAACTGTGGCTGAATCGTGACAAGAGGATCGTCGGGGCGATCCCTGGAATTTTGGTCGGGGATTTATTCCTTTTTCGGATGGAGCTGTGTGTGGTGGGATTGCACGGACAGATACAGGCTGGAATAGATTATCTTCCAGCAAGCATGAGTTCCACCGGGGAGCCTATAGCCACGAGCGTGATTGTTTCCGGTGGCTACGAGGATGATATGGATGATGGTGAGGTTATAGTTTACACTGGCCATGGAGGGCAGGAGAAGAATTCCAATAGGCAGGTTTCTCATCAGAAGTTGGAGTCGGGGAACCTTGCATTGGAGAGGAGTATGCATTATGGTGTCGAGGTGAGGGTTATTCGTGGGATGAAGTACGAGGGGAGCGCGTCTGCCTCTGGTAAGGTGTATGTGTATGACGGGGTGTATAGGATTGTTGATTGCTGGTTTGATGTGGGGAGGTCGGGTTTTGGGGTTTATAAGTTTAAGCTTTGGAGGATTGAGGGGCAGCCTAAGATGGGTAGTGCTGTTTTGAAGGAGGCTAGGAATATTAGGAAGAGTCAGTTGGATTTGAATGATCCTGTGTGTTGTGTTGCTGCTGATATGTCAAACAAGAAGGAGAATGTTGCGGTTCGGCTTTTTAATGACATAGATGACGACCGGGGTCCTCTTTGCTATGAGTATCTAGCCAGGACTAGTTTTCCGCAGTTTGTGTTTCATCAGAGTGGGAAAGCTTCTGGCTGTGACTGTGTAGATGGTTGTGGTGATGGATGCTTTTGTGCTATGAAAAATGGGGGTGAGTTTCCTTATACTCTGCAGGGACATCTCGTGAGAGGGAAGCCTTTGATTTTTGAATGTGGCCCTTTTTGCTCTTGTCCTCCTCATTGTCGCAATCGTGTTGTGCAGAAGGGGCTGAAATATAGATTGGAAGTGTTTAGGTCTCAGCAGACAGCTTGGGGAGTTAGGTCCTTGGACCTTATTCAAGCTGGTTCTTTTATCTGTGAGTTTGCAGGGGTTGTTTTGACCAGGGAGCAAGGACAACTCTTGACAATGAATGGTGACTCATTGATATATCCTAGTCGGTTTTCTGAAAGATGGGCAGAATGGGGAGATTTGTCTCAGATATACCCAGATTATGTGCGTCCATCGTATCCATCAATTCCTCCTTTAGATTTTTCTCTGGATGTGTCAACGATGAGGAATGTTGCTTGCTATATGAGCCATAGTTCAACTCCAAATGTCTTGGTTCAGTTTGTTCTGCATGATCACAACAATTTGATGTTCCCACACCTTATGCTATTTGCAATGGAAAACATCCCTCCCATGAGAGAGCTCAGCCTTGATTATGGTGTAGCTGATGAGTGGACAGGCAAGCTCTCTATATGTAACTGA 2064 0.5107 MMDSVFSLDTPTITNAASSSLPPPTTLLVPKPEPFWDSHHDDFSDELDLYTEFNRVTELFHFAFGATNVVDPSFGAAAAPNNNVAFSEPNPHPPDLNAVAAVPPDPNSPSGDVSGAIIPVPEHDGTVAAPRRKQSRQKELVRVMDLSPRDEAYLRETVRRTRLVYDSLRVLTSMEEEKRVASAAAAAAAAVMAEATPVEGSPPVESGSTGRARRLRGDLRAAGLMRERELWLNRDKRIVGAIPGILVGDLFLFRMELCVVGLHGQIQAGIDYLPASMSSTGEPIATSVIVSGGYEDDMDDGEVIVYTGHGGQEKNSNRQVSHQKLESGNLALERSMHYGVEVRVIRGMKYEGSASASGKVYVYDGVYRIVDCWFDVGRSGFGVYKFKLWRIEGQPKMGSAVLKEARNIRKSQLDLNDPVCCVAADMSNKKENVAVRLFNDIDDDRGPLCYEYLARTSFPQFVFHQSGKASGCDCVDGCGDGCFCAMKNGGEFPYTLQGHLVRGKPLIFECGPFCSCPPHCRNRVVQKGLKYRLEVFRSQQTAWGVRSLDLIQAGSFICEFAGVVLTREQGQLLTMNGDSLIYPSRFSERWAEWGDLSQIYPDYVRPSYPSIPPLDFSLDVSTMRNVACYMSHSSTPNVLVQFVLHDHNNLMFPHLMLFAMENIPPMRELSLDYGVADEWTGKLSICN 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1433 687 Pfam SAD/SRA domain 239 394 IPR003105 -
Aed7g1433 687 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 24 684 - -
Aed7g1433 687 SUPERFAMILY PUA domain-like 221 405 IPR015947 -
Aed7g1433 687 Pfam SET domain 543 674 IPR001214 GO:0005515
Aed7g1433 687 ProSiteProfiles SET domain profile. 531 674 IPR001214 GO:0005515
Aed7g1433 687 SMART set_7 531 680 IPR001214 GO:0005515
Aed7g1433 687 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 39 687 IPR025794 GO:0016571
Aed7g1433 687 Gene3D SET domain 399 687 IPR046341 -
Aed7g1433 687 SUPERFAMILY SET domain 432 685 IPR046341 -
Aed7g1433 687 ProSiteProfiles YDG domain profile. 240 390 IPR003105 -
Aed7g1433 687 SMART G9a_1 235 394 IPR003105 -
Aed7g1433 687 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 24 684 - -
Aed7g1433 687 Gene3D - 237 398 IPR036987 -
Aed7g1433 687 ProSiteProfiles Pre-SET domain profile. 470 528 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed7g1433 687 Pfam Pre-SET motif 426 523 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed7g1433 687 SMART preset_2 423 515 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1433 Aed-Chr7 13898400 13900463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1433 220 676 Su(var)3-9 homologs AT1G73100 40.645 2.83e-104 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed7g1433 SAD_SRA 5.4e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1433 K11420 - gmx:100785015 1127.85