Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1427 ATGGCTCGCTCTGTGCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTCCTTCTGGTTGCCACTGCAAGAACTTGTGAGTCTCAGAGCCACCGTTTCAAGGGGCCATGTGTGAGTGACACCAACTGTGGTTCCGTTTGCCGAAACGAACGTTTCACTGGTGGACAATGCCGTGGCTTCCGTCGCAGATGCTTCTGCACCAAACATTGTTAA 210 0.5048 MARSVPLVSTIFVLLLLLVATARTCESQSHRFKGPCVSDTNCGSVCRNERFTGGQCRGFRRRCFCTKHC 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1427 69 ProSitePatterns Gamma-thionins family signature. 23 46 IPR008176 GO:0006952
Aed7g1427 69 PANTHER DEFENSIN-LIKE PROTEIN 1 1 69 - -
Aed7g1427 69 SUPERFAMILY Scorpion toxin-like 23 69 IPR036574 -
Aed7g1427 69 Pfam Gamma-thionin family 23 69 - -
Aed7g1427 69 PRINTS Purothionin signature 24 39 IPR008176 GO:0006952
Aed7g1427 69 PRINTS Purothionin signature 54 68 IPR008176 GO:0006952
Aed7g1427 69 PANTHER DEFENSIN SD2 1 69 - -
Aed7g1427 69 Gene3D - 22 69 IPR036574 -
Aed7g1427 69 SMART gth_4 24 69 IPR003614 GO:0006952
Aed7g1427 69 CDD Knot1 34 66 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1427 Aed-Chr7 13751834 13752894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1427 1 69 Plant Defensins Gene Families AT2G02100 58.442 5.33e-28 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1427 - - gmx:547843 114.39