Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1408 ATGCTTCTGGACAAGAATGATATTAATCAGGAAACCCATTATGAGGTTCTCAATGTCAAAGAAGATGCAAATTATGAAGAAATCCGTGCTAGTTACCGAAGTTCTGTACTCAGCTTACATCCCGATAAGCAATTGAAGATGTCCGAGACATCCAGCAGTAATCAAACAGCAGAAGCCGGAGAGAGATTTCTGAAAGTACAAAAGGCGTGGGAGATTCTGAGTAACTCTAGCTCCCGTTCGTTTTACGACAACAAGCTGCGAAGTTCAAGGCAGGATGACGATGATGTCATGGCTGCTGCTGACGTTGCTGTAGATTTGAGCTTAGAGGACATGATGATTGAAGAAGATAAAGGAGAAGCAATATTGGAACTGTTTTATCAATGCAGATGCGGTGATTACTTCTCTGTGGACTCGTTGGAATTGAAGAAAATGGGATATTCCTTATTGAGGGAGCAGGGAAGTGGGATATCTATAGTGAATGTTGATACATTATTACCAGGATCAGTGATTCTTCCATGTGGATCTTGTTCCTTAAAAGCTCGTCTGCTAATCAATATGGATGCCAATTGA 570 0.4123 MLLDKNDINQETHYEVLNVKEDANYEEIRASYRSSVLSLHPDKQLKMSETSSSNQTAEAGERFLKVQKAWEILSNSSSRSFYDNKLRSSRQDDDDVMAAADVAVDLSLEDMMIEEDKGEAILELFYQCRCGDYFSVDSLELKKMGYSLLREQGSGISIVNVDTLLPGSVILPCGSCSLKARLLINMDAN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1408 189 Gene3D DPH Zinc finger 95 189 IPR036671 -
Aed7g1408 189 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4 1 187 - -
Aed7g1408 189 SMART dnaj_3 11 78 IPR001623 -
Aed7g1408 189 SUPERFAMILY CSL zinc finger 106 186 IPR036671 -
Aed7g1408 189 PANTHER DPH3 HOMOLOG-RELATED 1 187 IPR044248 GO:0017183|GO:0046872
Aed7g1408 189 Pfam DnaJ domain 12 83 IPR001623 -
Aed7g1408 189 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 102 185 IPR007872 -
Aed7g1408 189 CDD DnaJ 12 75 IPR001623 -
Aed7g1408 189 ProSiteProfiles dnaJ domain profile. 12 86 IPR001623 -
Aed7g1408 189 Pfam CSL zinc finger 106 183 IPR007872 -
Aed7g1408 189 PRINTS DnaJ domain signature 32 47 IPR001623 -
Aed7g1408 189 PRINTS DnaJ domain signature 14 32 IPR001623 -
Aed7g1408 189 PRINTS DnaJ domain signature 58 78 IPR001623 -
Aed7g1408 189 SUPERFAMILY Chaperone J-domain 9 86 IPR036869 -
Aed7g1408 189 Gene3D DnaJ domain 2 91 IPR036869 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1408 13 83 C2H2 Transcription Factor Family AT1G74250 40.845 5.98e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1408 K17867 - gmx:100814856 288.5