Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1393 ATGTCTTTGATATCATACCGTGATTTGGTTGGTGTTGCTTATACAGAAGATGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCACTTTCCTCAGCCTTATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCTGATCTAAGTCTTGTTACCAAAGCTCGTCACAATGGTCAGAACTATGTGTTTGCACTTTTAACCGGTTATCGTGACCCTCCAGCTGGTGTTTCGATTAGAGAAGGACTGCACTATAATCCTTATTTTCCTGGCGGGGCCATTGCTATGCCTAAAATGCTTAATGATGGTGCTCTTGAATATGAAGATGGCACCCCTGCTACAGAATCTCAGATGGGATTTAAATGGATATTTGTTCTATCACTGGCATTACTTCAAGCTGCGTATTACCGTCGCCTCCGGTGGTCTGTTCTAAAGTCTCGCAAGCTGGTTCTTGATGTTGTCAACTAG 534 0.4457 MSLISYRDLVGVAYTEDEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDHFPQPYANEAAARFANGGAYPPDLSLVTKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGALEYEDGTPATESQMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1393 177 Gene3D - 1 140 IPR036909 GO:0009055|GO:0020037
Aed7g1393 177 Pfam Cytochrome C1 family 1 141 IPR002326 GO:0009055|GO:0020037
Aed7g1393 177 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 140 177 - -
Aed7g1393 177 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 1 141 - -
Aed7g1393 177 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 138 176 IPR021157 -
Aed7g1393 177 Gene3D - 141 176 - -
Aed7g1393 177 PRINTS Cytochrome C1 signature 33 53 IPR002326 GO:0009055|GO:0020037
Aed7g1393 177 PRINTS Cytochrome C1 signature 115 134 IPR002326 GO:0009055|GO:0020037
Aed7g1393 177 PRINTS Cytochrome C1 signature 104 115 IPR002326 GO:0009055|GO:0020037
Aed7g1393 177 PRINTS Cytochrome C1 signature 66 90 IPR002326 GO:0009055|GO:0020037
Aed7g1393 177 PANTHER CYTOCHROME C1 140 177 IPR002326 GO:0009055|GO:0020037
Aed7g1393 177 SUPERFAMILY Cytochrome c 1 142 IPR036909 GO:0009055|GO:0020037
Aed7g1393 177 PANTHER CYTOCHROME C1 1 141 IPR002326 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1393 Aed-Chr7 12596690 12603107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1393 1 177 Chloroplast and Mitochondria Gene Families AT5G40810 82.412 1.69e-101 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1393 K00413 - gmx:100796742 334.339