Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1368 ATGGCTTTGACGGTAGAAGACCAAGGTTTGAATGCTATGAGCTTCTTATGGGAAAATCACTCATGGGATCTCTCCAATTCTGATAATTTGGATGAAAGTAAGGAAAACATGAAGTCACTAAACCAAAAAGAAGAAAAAGATGAAACTCTCATGAATAAGAAGCGAAATCGAGACCACAGCACTATTACAAGTGGTGAAGAAAAAAGAAAAAAGTGTCGTGAACCTGAAATGCACATGTGGACAGAGAGAGAAAGGAGGAAGAAAATGAAGAATATGTTCGAAAGTCTTCATGCTTTGCTTCCACATCTTCCTACTAAGCAAACCCTCAAAAAGCTAGAGAAACTGAAGCAAGAAAGGGCCCAATGTATCTCAACTTTTGGGTCTAAGACATCTATGTTTGTCACTGGTCAGACTCAGGGATCTTCTATTTCTAACAACTTTTCCAATGAAAATATGGGATTGGAAACTACTACTATTACTACTTCAAATGCATTTTCATTCCCTGGGCCTGAGCTTGGGCCCCAGCCAGTGGTGGCTTTTGACAAAACTTGGGTCTCTCCAAATTTGGTCCTGAACATTTGTGGAGATGAGGCCCAATTCTCCATTTATGCGGCCCGTAAGCCCGGCCTCATCACCACCATTGCTTTTGTGCTGGAGAAGTACAAGATAGATGGAAAACGAGTTTCAAATCAGCTTCTGGATGCAAGTTTATTGGATGAGATTTACCAGCAAGCAGCCAAAGAGATGATAATGTGGATCGCTTGA 765 0.4105 MALTVEDQGLNAMSFLWENHSWDLSNSDNLDESKENMKSLNQKEEKDETLMNKKRNRDHSTITSGEEKRKKCREPEMHMWTERERRKKMKNMFESLHALLPHLPTKQTLKKLEKLKQERAQCISTFGSKTSMFVTGQTQGSSISNNFSNENMGLETTTITTSNAFSFPGPELGPQPVVAFDKTWVSPNLVLNICGDEAQFSIYAARKPGLITTIAFVLEKYKIDGKRVSNQLLDASLLDEIYQQAAKEMIMWIA 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1368 254 Gene3D - 64 127 IPR036638 GO:0046983
Aed7g1368 254 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 116 IPR036638 GO:0046983
Aed7g1368 254 Pfam Helix-loop-helix DNA-binding domain 81 115 IPR011598 GO:0046983
Aed7g1368 254 Coils Coil 27 50 - -
Aed7g1368 254 MobiDBLite consensus disorder prediction 28 73 - -
Aed7g1368 254 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 125 IPR011598 GO:0046983
Aed7g1368 254 PANTHER - 15 224 IPR044278 GO:0003700|GO:0006355|GO:0009960
Aed7g1368 254 PANTHER TRANSCRIPTION FACTOR BHLH95 15 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1368 Aed-Chr7 11897246 11899751 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1368 11 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 29.032 1.63e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed7g1368 HLH 1.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1368 - - gmx:102665879 298.13