Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1364 ATGGTGAAGCATAACAATGTTATCCCCAATGGGCACTTCCGGAAACACTGGCAAAACTATGTGAAGACTTGGTTTAATCAACCAGCACGGAAGACCAGAAGACGGCAGGCTCGGCAGAAGAAGGCTGTCAAGATTTTTCCCAGGCCTACTGCTGGACCTCTCAGGCCTATTGTTCATGGCCAGACTTTGAAATACAACATGAAAGTCAGAGCTGGCAGAGGATTTTCTCTTGAAGAATTGAAGGCTGCTGGCATTCCCAAAAAACTTGCTCCAACTATTGGAATTGCTGTTGATCATCGCCGCAAGAATCGTTCTTTGGAGGGCCAGCAGGCTAATGTGCAGAGGCTTAAAACATACAAGGCCAAGTTGGTTGTCTTCCCAAGACGGGCACCCAAGGTCAAGGCTGGTGATTCTAGCCCTGAAGAACTGGCGAATGCAACTCAAGTCCAGGGTCCATTCTTGCCCATTGTGAGGGAGAGGCCAACTGTTGAACTTGTTAAGGTGACAGATGAGATGAAGGCGTTCAAAGCTTATTATAAGCTTCGTCTTGAACGCACCAACCAACGCCACTTTGGTGCCCGCCTAAAGAAAGCTGCCGAAGCAGAGAAGGAAGATAAGAAATGA 624 0.4792 MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTRRRQARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGQQANVQRLKTYKAKLVVFPRRAPKVKAGDSSPEELANATQVQGPFLPIVRERPTVELVKVTDEMKAFKAYYKLRLERTNQRHFGARLKKAAEAEKEDKK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1364 207 Pfam Ribosomal protein L13e 7 185 IPR001380 GO:0003735|GO:0005840|GO:0006412
Aed7g1364 207 Gene3D - 167 207 - -
Aed7g1364 207 PANTHER 60S RIBOSOMAL PROTEIN L13 1 207 IPR001380 GO:0003735|GO:0005840|GO:0006412
Aed7g1364 207 Hamap 50S ribosomal protein L13e [rpl13e]. 45 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
Aed7g1364 207 PANTHER 60S RIBOSOMAL PROTEIN L13 1 207 - -
Aed7g1364 207 ProSitePatterns Ribosomal protein L13e signature. 70 84 IPR018256 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1364 Aed-Chr7 11838989 11841313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1364 2 192 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 86.387 2.67e-124 348