Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1362 ATGGACAATGAAGACTCGCCACTGCTCCATGGCAAAGTGGGCACCATACTAATAGCCATGGGATCAGCCAGCTTCGTGGTCACAGTGTTCCATCTCGTAATCCTCTGTCGCACCCACCACCACGTCACCAACCAACATTCACAACAACAACGACGACAACAACAACAAGCAACGCGGTGCACGGGAGAGAACGCTTTGGTAGTGCCGCACCTGATTCCAGCCCACAAGTACCAGAAGAAGAAGAGTGACGGTGACGACAACGAGGATGACACGTGTGCCGTGTGCTTGGGAGAGTTCGAAGAGGGCGAGGAACTGAGGATGCTGCCGGAGTGCATGCACTATTTCCACGTGGCGTGCATAGACACGTGGCTCTATTCCCATTCCAACTGTCCCGTTTGCCGGGGCCGTGCCACGCCTTCTCCGGCAGCGGTGGAGCGCCGCTCAGAGCCGGACAATAATGACTTCTTAGCTATCCAATTTGATTCTCTATATAGTAAGAAATATTGTCATATTCATAACCTATCTGTGGCTAATCCTCCTCGCCAGTGTGTTAACCCTTCTTCTCTTCTATATCTTGATTTGTCACTTAACAAGAATCTTGCCATCAATAGTCTTCAATGGCTTTCTCGCATTTCCTCGGAATATCTGAACCTCAATTGCATTGACCTTCACAAGGAAACTAATTGGCTTCAACATGTAACTATGCTTCCATCACTTTCACAGCTCCGCATGAGCACTTGTGGACTTAAAGACTTGAGTGCATCCCTTCAATATGCTAATTTCATTGCACTCAAATATCTTGATCTTTCTTACAATGAATTTCACTCAAAGTTGCCTAAATGGTTATTCAATCTCACTAGTGGTGTCTCTCATATTGACCTCACTTCAAATTCTTTAGTAGGCCCACTACCTGAGGCATTATTGAATCTTCGACATTTGGAAGTATTGGTGTTGCAAGAAAATTTTCTTAATGGTCCAATTACAAATTGGTTAGGCCAACTTGAACATCTAAGATGTCTTGTTCTTGGAATAAACATGTTTTCTGGTTCTATTCCCACAAATTTGGGGAATTTATCATCCTTAGCTTTCTTGTTTGTCTGCGGAAATAATTTGACAGGAGTTTTGTCAGAGAAATTTTTTGCCAAACTGTCAAAATTAAAGGAATTGTATATATCCACATCATCACCATTAATCTTTGATTTTGACTCCCATTGGGTTCCACCTTTTCAACTTAGACGACTAAATCTCGCATTTGCAGGTCCGAACTTTCTCATGTGGTTATATACACAAACATCTCTTAAACGCTTATCTATTCATGAATCATCATTTGAGGCTCAAGGCAAATTTTGGGACTTTGTATCAAGACTGGATGAACTTGTTTTAGAGGGTAACTTGATAGATGGGAACCTGTCAAATGTTTTGTTGAACTCTACATTTGTAGATATTTCATCAAATGGTCTGAAAGGTTTCCTGCCTCGATTATCATCAAATGTGGCCTATCTCTTCATAACAAACAACTCACTATTAGGAGACCCCTCCTCCTTCTTGTGTGATCAAAAGATGGTGAATGGAAAAAGCAATTTGGTGTACTTGGACCTATCTCAGAACCGTTTATTTGGAGGGCTTACAAATTGCTGGAAGAACTAG 1647 0.4226 MDNEDSPLLHGKVGTILIAMGSASFVVTVFHLVILCRTHHHVTNQHSQQQRRQQQQATRCTGENALVVPHLIPAHKYQKKKSDGDDNEDDTCAVCLGEFEEGEELRMLPECMHYFHVACIDTWLYSHSNCPVCRGRATPSPAAVERRSEPDNNDFLAIQFDSLYSKKYCHIHNLSVANPPRQCVNPSSLLYLDLSLNKNLAINSLQWLSRISSEYLNLNCIDLHKETNWLQHVTMLPSLSQLRMSTCGLKDLSASLQYANFIALKYLDLSYNEFHSKLPKWLFNLTSGVSHIDLTSNSLVGPLPEALLNLRHLEVLVLQENFLNGPITNWLGQLEHLRCLVLGINMFSGSIPTNLGNLSSLAFLFVCGNNLTGVLSEKFFAKLSKLKELYISTSSPLIFDFDSHWVPPFQLRRLNLAFAGPNFLMWLYTQTSLKRLSIHESSFEAQGKFWDFVSRLDELVLEGNLIDGNLSNVLLNSTFVDISSNGLKGFLPRLSSNVAYLFITNNSLLGDPSSFLCDQKMVNGKSNLVYLDLSQNRLFGGLTNCWKN 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1362 548 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 170 301 - -
Aed7g1362 548 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 289 547 - -
Aed7g1362 548 SUPERFAMILY RING/U-box 78 139 - -
Aed7g1362 548 SMART ring_2 92 133 IPR001841 -
Aed7g1362 548 Gene3D Ribonuclease Inhibitor 402 548 IPR032675 -
Aed7g1362 548 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 141 IPR013083 -
Aed7g1362 548 Gene3D Ribonuclease Inhibitor 151 401 IPR032675 -
Aed7g1362 548 SUPERFAMILY L domain-like 171 544 - -
Aed7g1362 548 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 289 547 - -
Aed7g1362 548 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED 170 301 - -
Aed7g1362 548 ProSiteProfiles Zinc finger RING-type profile. 92 134 IPR001841 -
Aed7g1362 548 Pfam Ring finger domain 90 134 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1362 Aed-Chr7 11789457 11793348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1362 86 149 C3H Transcription Factor Family AT3G10910 55.224 9.10e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1362 - - var:108324730 484.182