Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1356 ATGATCATTAGAACCATTTGTGGAAGGCTAAGAGGGGGTGTTGAGTCTCAGATGATGAATGAGATTGAATCAAGAATTGATATAGAACAGTCAAGACATCATGTTAATGACCCTAAATCCGATCTTGTTCTACTTGATGCAATTTGTATAATATGTTTGGCAAATTACAAAGAAAGAGAAGTATTGCGCATCATGCCAAAATGTGGCCACACTTTTCATCTTTCTTGCATTGATATATGGCTAAGAAAAAAATATACTTGTCCAGTATGCCATCTTCCATTGAAGAACTCCAAAATGAAACATGTGAGATCTGTGGCATTTACCATGAGCCAGTCCTTTGATGAGTCTCACACATCAGAAAGAAATGAAGATACAACTAGTAACTCTTTACAACCAACATTAGGAGAACAAGAACATAAAGTATATTTTAAGTATATATACATTTAA 447 0.3423 MIIRTICGRLRGGVESQMMNEIESRIDIEQSRHHVNDPKSDLVLLDAICIICLANYKEREVLRIMPKCGHTFHLSCIDIWLRKKYTCPVCHLPLKNSKMKHVRSVAFTMSQSFDESHTSERNEDTTSNSLQPTLGEQEHKVYFKYIYI 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1356 148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 102 IPR013083 -
Aed7g1356 148 Pfam Ring finger domain 49 90 IPR001841 -
Aed7g1356 148 ProSiteProfiles Zinc finger RING-type profile. 49 91 IPR001841 -
Aed7g1356 148 SMART ring_2 49 90 IPR001841 -
Aed7g1356 148 PANTHER OS02G0676500 PROTEIN 46 125 - -
Aed7g1356 148 PANTHER OS11G0150450 PROTEIN 46 125 - -
Aed7g1356 148 SUPERFAMILY RING/U-box 48 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1356 Aed-Chr7 11711419 11712057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1356 39 94 C3H Transcription Factor Family AT4G10150 48.214 1.76e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1356 - - gmx:100780922 213.001