Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1354 ATGGAGATTTCAAGAAAGGGCCAATGGTTAAGTCTTCTGATATGTGTAGCAGTACTGTTACTAAAGGCAGAAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGTTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCGAAAACCAATTTGCACTTCAGAGGAGGAAGGGTTTTTGCTGCTGTGGTTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAATGCAATTATCTCTGGATGTTCAGCTGGAGGGTTGGCTTCTATTTTAAATTGCGATCGATTCAAGAAGGATGTCTCTGGAGCACAACGCATTCAAGAGTTCTATAGTCAAGTTGTTCAAACACATGGCTCAGCCAAGAATTTGCCTTCATCCTGCACTTCAAGACTCGGACCAGGGCTGTGCTTTTTCCCACAAAATGTGGTGTCCCAAATCAGTACCCCAATATTCTTTGTAAATGCAGCCTATGACTCATGGCAGATCAAAAACATTTTGGCACCAGGCGCTGCTGATCCCCATGGCCAATGGCGCGAATGCAAGGTTGATATAAAAAACTGCTCACCTAATCAACTCAGTGTAATGCAAGGATTCAGGACAGATTTCTTAAGGGCATTTAGTGTGGCTGGGAGCTCTGCATCTAAAGGGCATTTTATAGATGGTTGCTATGCACACTGCCAAACTGGAATACAAGAGACATGGTTGAGAAATGACTCTCCTCTGGTTGCCAAGACATCAATTGCAAAGGCAGTGGGAGATTGGTATTATGATCGAAGGGCATTCAGTGAGATAGATTGTGCCTACCCTTGCAACCCTACTTGCCATAATCGTATTTTTGACCAGAATGAGCGTCCAGACGTATAG 876 0.4269 MEISRKGQWLSLLICVAVLLLKAEDFYDWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGGRVFAAVVEDLLAKGMKNAKNAIISGCSAGGLASILNCDRFKKDVSGAQRIQEFYSQVVQTHGSAKNLPSSCTSRLGPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNILAPGAADPHGQWRECKVDIKNCSPNQLSVMQGFRTDFLRAFSVAGSSASKGHFIDGCYAHCQTGIQETWLRNDSPLVAKTSIAKAVGDWYYDRRAFSEIDCAYPCNPTCHNRIFDQNERPDV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1354 291 Pfam Pectinacetylesterase 102 263 IPR004963 GO:0016787
Aed7g1354 291 PANTHER PECTIN ACETYLESTERASE 25 101 - -
Aed7g1354 291 PANTHER PECTIN ACETYLESTERASE 102 286 - -
Aed7g1354 291 PANTHER NOTUM-RELATED 25 101 IPR004963 GO:0016787
Aed7g1354 291 PANTHER NOTUM-RELATED 102 286 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1354 Aed-Chr7 11573168 11578402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1354 25 291 Carbohydrate Esterase AT4G19420 53.560 1.39e-125 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1354 K19882 - gmx:100781246 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1354 7 11573168 11578402 Aed7g1354 7 11573168 11578402 ECH
Aed11g1055 11 16272741 16279818 Aed7g1354 7 11573168 11578402 PCT