Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1353 ATGGAGAGTGCAAGCATCAGCCAATGGTTGAATCTTCTGGTTTGTGTGCTGCTATTGCTTAAGACAGAAGGATCTTTAGTTCCATTGACTTTGCTCGAGAATGCAGAATCAAAAGGAGCTGTTTGTTTAGATGGAAGTCCCCCAGCTTACCACTTTGATAAGGGATCTGGAGAAGGGACTAATAACTGGATTGTTCACATTGAGGGAGGAGGATGGTGCAACAATGTTAAGAATTGCCTTGATCGAAAAAGCACTAGCTTAGGTTCATCTACACAAATGGATGATCTTTACTTTTCTGGAATTTTAAGCAACGACCAAGAGTATAATCCAGATTTCTACAATTGGAATAGAGTCAAGGTTAGGTACTGTGATGGCTCATCGTTTACTGGTGATGTGGAAGAAGTTGATCCAACAACCAATTTGCACTTCAGAGGAGCAAGGATTTTTCAAGTTGTAATGGAAGAATTACTAGCAAAAGGATTGGAAAATGCTGACAATTTTCTTAGATCATTGAATGATTTAATGTGGTGTTGTACAATAGAGATGATATCTCAGGAGCACATTTCATTCAAGAGTACTACAGTGAAGTTGTTTCAACACATGGTTCAGCAAAGAATTTGCCCACATCCTGCACTTCAAAACTCAGCCCAGAACTAG 657 0.3942 MESASISQWLNLLVCVLLLLKTEGSLVPLTLLENAESKGAVCLDGSPPAYHFDKGSGEGTNNWIVHIEGGGWCNNVKNCLDRKSTSLGSSTQMDDLYFSGILSNDQEYNPDFYNWNRVKVRYCDGSSFTGDVEEVDPTTNLHFRGARIFQVVMEELLAKGLENADNFLRSLNDLMWCCTIEMISQEHISFKSTTVKLFQHMVQQRICPHPALQNSAQN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1353 218 Pfam Pectinacetylesterase 21 168 IPR004963 GO:0016787
Aed7g1353 218 PANTHER PECTIN ACETYLESTERASE 4 168 - -
Aed7g1353 218 PANTHER NOTUM-RELATED 4 168 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1353 Aed-Chr7 11562938 11567138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1353 6 177 Carbohydrate Esterase AT4G19420 62.570 2.64e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1353 K19882 - gmx:100780171 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1353 7 11562938 11567138 Aed7g1353 7 11562938 11567138 ECH
Aed7g1353 7 11562938 11567138 Aed11g1055 11 16272741 16279818 PCT