Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1337 ATGCCAGAAAACTGCATAGCACCCAAACCAGGACACAACAACAACACTCACCCTGAGGAAGGACCACCACCACCACCTGAGATGTCTGAGTCTGAGACCTTTGAGGAATTGATGTACAAAGTTAAAGTAGAGCAGAAAGGTGGTGTGTGTTGGGGGAGCACAAGGAGTTCAAAAGAGAAGACCATACTGAAAGGAGTGACAGGCATGGATGATGTGCTCTACCCTCATCTCACAGTCTCTGAGACCCTCCTCTTCACTGCACTCCTGAGGCTCCCAAACACCTTAACCAAAGAAGAGAAACTTCACCATGTGGAGCATGTGATCACTGAGCTAGGGCTGAGTAGGTGCAGGGGAAGCATGATTGGAGGGCCATTCTTCAGAGGGATTTCAGGAGGGGAGAGAAAGAGGGTCAGCATAGGCCAGGAAATGCTCATCAACCCAAGCCTCTTGCTGCTTGATGAACCTACCTCAGGGTTGGACTCAACAACAGCACAGAGGATCATTACCACAATCAAAGGCTTGGCTTGTGGTGGAAGAACTGTTGTCACCACCATTCATCAACCCTCTAGCAGACTCTATCACATGTTTGATAAAGTTGTGTTGCTATCTGAAGGGTGCCCAATCTACTATGGCCCTGCTTCATCTGCAATTGACTACTTTTCTTCTGTTGGTTTCTCCACTTCCATGAATGTCAATCCTGCTGATTTAATGCTTGATCTTGCCAATGGGATTGCTCCAGAACCCTCCAAGCAGCATGCAACTGAACAAAGTGAGAGCCAGGAGGAGGAAAAGAAGTTGGTGAGGGAAGCTTTAATCTCTGCTTATGACAAGAACATAGCTACTAAGCTGAAAGATGAGCTATGTAGCTTGGAAGTGCTGAATAACTACAAAGTCATTAAGGATGCTTCCACAATTCTATTGCAAAGGGGACTCAAGGAGAGAAGGTTTGAAGCCTTCAACAGGCTGAGAATATTCCAAGTCATAAGTGTCGCTTTCCTTGGTGGACTCCTGTGGTGGCACACACCAGAATCACACATTGGAGATCGGATAGCCCTGCTCTTCTTCTTCTCAGTCTTCTGGGGATTCTACCCTCTCTACAATGCAGTATTCACATTCCCACAAGAGAGAAGAATGCTGATCAAGGAACGTTCATCAGGAATGTACCGTCTCTCCTCCTACTTCCTAGCAAGAACAGTAGGAGACTTACCAATAGAGCTTGCACTCCCAACAGCATTTGTCATCATAATCTATTGGATGGGAGGACTAAACCCTCATCCAACAACCTTCATCACTACCCTCATTGTGGTCCTCTACAGTGTCCTTGTCTCACAAAGCCTTGGCCTTGCATTTGGTGCAATTCTCATGGATGTCAAAAAGGCCACAACTTTGGCCTCTGTCACAACCCTTGTGTTCCTCATTGCTGGTGGCTACTACATTCAGCAGATCCCTCCCTTCATTGAGTGGCTCAAGTACTTGAGCTATAGCTACTATTGTTACAAGCTTCTTGTTGGTGTGCAATACAATGATGGTGATTTCTATGAGTGTTCTTCAAAGGGTGTGTTGTGCAAAGTTGGTGAGTTTCCTCCTATCAAATCTGTGGGCTTGGATCACTTGTGGGTTGATGTGGCTGTTATGGCTATGATGTTGCTTGGTTACAGGCTAATTGCTTATTTAGCACTGCAGAGAGTGAGGTAG 1695 0.4619 MPENCIAPKPGHNNNTHPEEGPPPPPEMSESETFEELMYKVKVEQKGGVCWGSTRSSKEKTILKGVTGMDDVLYPHLTVSETLLFTALLRLPNTLTKEEKLHHVEHVITELGLSRCRGSMIGGPFFRGISGGERKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIITTIKGLACGGRTVVTTIHQPSSRLYHMFDKVVLLSEGCPIYYGPASSAIDYFSSVGFSTSMNVNPADLMLDLANGIAPEPSKQHATEQSESQEEEKKLVREALISAYDKNIATKLKDELCSLEVLNNYKVIKDASTILLQRGLKERRFEAFNRLRIFQVISVAFLGGLLWWHTPESHIGDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTVGDLPIELALPTAFVIIIYWMGGLNPHPTTFITTLIVVLYSVLVSQSLGLAFGAILMDVKKATTLASVTTLVFLIAGGYYIQQIPPFIEWLKYLSYSYYCYKLLVGVQYNDGDFYECSSKGVLCKVGEFPPIKSVGLDHLWVDVAVMAMMLLGYRLIAYLALQRVR 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1337 564 Coils Coil 250 270 - -
Aed7g1337 564 Pfam ABC transporter 65 157 IPR003439 GO:0005524
Aed7g1337 564 MobiDBLite consensus disorder prediction 1 31 - -
Aed7g1337 564 Pfam ABC-2 type transporter 305 507 IPR013525 GO:0016020|GO:0140359
Aed7g1337 564 ProSitePatterns ABC transporters family signature. 129 143 IPR017871 GO:0005524
Aed7g1337 564 Gene3D - 47 223 IPR027417 -
Aed7g1337 564 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 70 562 - -
Aed7g1337 564 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 33 68 - -
Aed7g1337 564 Pfam ABC-2 type transporter 186 253 IPR043926 GO:0140359
Aed7g1337 564 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 229 IPR003439 GO:0005524
Aed7g1337 564 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 70 562 - -
Aed7g1337 564 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 68 - -
Aed7g1337 564 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 223 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1337 Aed-Chr7 11237873 11241954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1337 129 205 Calmodulin-binding Proteins AT2G36910 36.364 4.79e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1337 K05681 - gmx:100781419 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1337 7 11237873 11241954 Aed7g1337 7 11237873 11241954 ECH