Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1336 ATGGACGACAAGATAGAGACTGCAGACAAAAAGGTGCTGGCTGATATCGTAAAATTGTCTCAAAAAAGAGGCCTGAAGGGTAAGCTGGGAGGCTGGGTAGAATTCTTGAACAGTCATGACAAAAAGCTTGGGGCACGCATGAGTGATCCATCAAAGAGATCTCATGAGATATTAACTGCATTTCTAAACACATTTTCAAAGGAGGAAGATTTAAAGTTTTTTGATAACATCATGCGGCATCATTCAAATCAATACGTGTTGGAGCGACTGAAAGATAAATCTTATGATTCCCCTGAACAGAAACTAGTCCAAGTAACACTGCAGCATCCTTTATATCCATTGGATTATTCATTTCCATCAATGGATGAGGGGTGGATGGTTATAAACTTCAATAACAATCCCAAGTTGATGAAGTCTACTGCAATGGTTGCTGTTGACTGTGAAATGGTTCTCTGTGAAGATGGGACTGAGGCGTTAGTTAAAGTCTGTGTGGTTGACCATAACCTAGAGGTCAAACTAAATGAACTTGTAAAACCTGACAAAGAAGTTGCAGACTACAGAACAGAGATAACTGGTGTCTCTTCTCAAGATCTAGAGGCGGTGACTTGCTCCTTGGCTGATATACAGAAACACATGGAGAAGTTGTTATCAACTGGAACCATATTAGTGGGACACAGTTTGCATAATGATCTGTCTGTGCTGAAGATTGATCATGCTGTGTTGGGCCATGAAGTTAGGGAAAAGGGTGCTCCACATAATTGTCTAGACGATGCACGTGCAGCTATGAACCTCGTTCTTGCGAAGATCAAACATGGAGTTGATAAGGAATTTCCAATTCCATTAGTTGAAGAGCATGTTCCAGAAAGTGAGAGGGCAAAGCTTCTTCTTCACAAGATACCAAACACTGTAAACAATGAAGCATTGCATAAACTTATTCCTGGAGATTTCAAAATTGAACTGAAGCCTTCCAGGAAAGGTGTAGGAAAAAATTATTCTGCCTTAGCAATTTTTAGAAGTTCACATAAGGCAGATGAGGCCTATGAAAATGTCCAAGGAAGCCAATTGAAGGATACATATGGACGTCCCCAGAAACTCATAACATTTCGGCTGAGTACAGGCATACTTGCCAATCTCTTTGTTCGGAAAATGGCAACTGAAGAACCCAACAATAACCAGAATCCATCTAAGAGGGCTTTACAAATGGATGAGGCAGTTGATGTTTCCAAGAAAGCAAAGATGGATCCAAAAATTGATGGAGAGATTGAAGCACTAAATCAACGATTGAAGCAAAGTGAATCCGAGATTGAATCGTTGAGGAAACAGCTGACACAAAAAGATTCTGAAATATCTACGCTGCATAAGACGGTATCCTCCTTAAAAAAGCTAAAGAAGTAA 1395 0.4007 MDDKIETADKKVLADIVKLSQKRGLKGKLGGWVEFLNSHDKKLGARMSDPSKRSHEILTAFLNTFSKEEDLKFFDNIMRHHSNQYVLERLKDKSYDSPEQKLVQVTLQHPLYPLDYSFPSMDEGWMVINFNNNPKLMKSTAMVAVDCEMVLCEDGTEALVKVCVVDHNLEVKLNELVKPDKEVADYRTEITGVSSQDLEAVTCSLADIQKHMEKLLSTGTILVGHSLHNDLSVLKIDHAVLGHEVREKGAPHNCLDDARAAMNLVLAKIKHGVDKEFPIPLVEEHVPESERAKLLLHKIPNTVNNEALHKLIPGDFKIELKPSRKGVGKNYSALAIFRSSHKADEAYENVQGSQLKDTYGRPQKLITFRLSTGILANLFVRKMATEEPNNNQNPSKRALQMDEAVDVSKKAKMDPKIDGEIEALNQRLKQSESEIESLRKQLTQKDSEISTLHKTVSSLKKLKK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1336 464 SUPERFAMILY Ribonuclease H-like 142 270 IPR012337 -
Aed7g1336 464 SMART exoiiiendus 141 274 IPR013520 -
Aed7g1336 464 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 239 407 - -
Aed7g1336 464 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 33 239 - -
Aed7g1336 464 Coils Coil 421 448 - -
Aed7g1336 464 Gene3D - 137 240 IPR036397 GO:0003676
Aed7g1336 464 PANTHER SMALL RNA DEGRADING NUCLEASE 2 239 407 - -
Aed7g1336 464 PANTHER SMALL RNA DEGRADING NUCLEASE 2 33 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1336 Aed-Chr7 11209324 11215080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1336 143 238 C2H2 Transcription Factor Family AT2G48100 36.190 1.22e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1336 K14570 - gmx:100785565 758.059