Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1319 ATGACCCTCCAAGAACCCGATTCAGCAGCAGAACCACCGCCACCGCCGGATTCCGCAGCCACCAATGGCGTCATCGCAGACGAAACCCCCGAACCACCGTCATCACCGCCTCCGCTCCCAACCCCGCCGCCGGAGCTTCGCGTCCCGCTATGGTGGCCGGAGGACGGAACCCTGAGCATGGATTGGGTGCAGAATCTGATGTTGTGCTTCGATTGGTCCTCACGGAACGTCCCTCCCTCGGAGCTACCCTCCGTTCTCCCCGTCCAAGTCTTGGACTCGCTAATCCTCATGGCCTCGAAGATGCTCCACAAGGAGCCCAATTGCGTCACCATTGACCCCTTCCGCCCTAGCCCCGACGATAACTCTTCGTCCTCCGCCTCCGCTGCCTCGGTCGTCGTCGTCGGAGATGTGCACGGGCAGCTGCACGATCTGCTGTTCCTCCTCCGAGATGCCGGATTCCCGTCGCAAGATCGAATCTTGGTCTTCAACGGGGATTACGTGGATCGGGGAGCTTGGGGGCTTGAAACGTTCTTGCTCTTGTTGGCTTGGAAGGTATTCATGCCACATAACATATATTTGCTACGAGGGAATCATGAATCGAAATACTGTACATCAGTTTATGGTTTTGAGAAAGAAGTAATGGTAAAGTATGGCGATAAAGGTAAGCATGTGTACCGGAAATGTTTGGGGTGCTTTGAAGGTCTTCCTTTGGCTTCTATTATAGCAGGGTGTGTATACACAGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGATGCCATCGAAGAGGTTCAAAGGAAAGAAGAACCGTAAGATTAATGTTAATCATGAGAGCAAAATTCTATCTCTTGGTTCCTTGGAAGAATTGTCTAAGTCTCGACGATCGGTTCTGGATCCTCCTTGGGAAGGCCCAAACTTGATTCCCGGTGATGTTTTGTGGTCTGATCCATCAAAAAAGCTTGGTCTTGCTCCAAACAAAGAAAGAGGCATTGGCTTGATGTGGGGTCCTGATATTACTGAAGAATTTTTGAAGAAGTACCAACTAAAGTTGATCATCAGGTCACATGAAGGTCCTGATGCTAGGGAAAAAAGGGATGGTTTTGAGGGAATGGATGAAGGTTACACTATTGATCATGTTGTAGATTCTGGAAAGCTGGTCACTGTGTTTAGTGCTCCAGATTATCCACAATTTCAGGCAACAGAGAAGAGGTATAACAACAAAGGTGCCTATGTTGTCCTTGAACCCCCGAATTTTGACAATCCTATATTTCATGGATTTTCAGCAGTTACTCCAAGGCCAAAGGTGAATCCCTATTACGATTACCAAGAGGTGATGGATTCCGATGAAGAATTGGATTTGGCCTCCATGGTAACTACCTGA 1380 0.4913 MTLQEPDSAAEPPPPPDSAATNGVIADETPEPPSSPPPLPTPPPELRVPLWWPEDGTLSMDWVQNLMLCFDWSSRNVPPSELPSVLPVQVLDSLILMASKMLHKEPNCVTIDPFRPSPDDNSSSSASAASVVVVGDVHGQLHDLLFLLRDAGFPSQDRILVFNGDYVDRGAWGLETFLLLLAWKVFMPHNIYLLRGNHESKYCTSVYGFEKEVMVKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVMPSKRFKGKKNRKINVNHESKILSLGSLEELSKSRRSVLDPPWEGPNLIPGDVLWSDPSKKLGLAPNKERGIGLMWGPDITEEFLKKYQLKLIIRSHEGPDAREKRDGFEGMDEGYTIDHVVDSGKLVTVFSAPDYPQFQATEKRYNNKGAYVVLEPPNFDNPIFHGFSAVTPRPKVNPYYDYQEVMDSDEELDLASMVTT 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1319 459 SUPERFAMILY Metallo-dependent phosphatases 84 438 IPR029052 -
Aed7g1319 459 Pfam Calcineurin-like phosphoesterase 130 358 IPR004843 GO:0016787
Aed7g1319 459 MobiDBLite consensus disorder prediction 1 42 - -
Aed7g1319 459 PRINTS Serine/threonine phosphatase family signature 130 157 IPR006186 GO:0016787
Aed7g1319 459 PRINTS Serine/threonine phosphatase family signature 193 217 IPR006186 GO:0016787
Aed7g1319 459 PRINTS Serine/threonine phosphatase family signature 384 400 IPR006186 GO:0016787
Aed7g1319 459 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Aed7g1319 459 PRINTS Serine/threonine phosphatase family signature 160 187 IPR006186 GO:0016787
Aed7g1319 459 PRINTS Serine/threonine phosphatase family signature 230 256 IPR006186 GO:0016787
Aed7g1319 459 Gene3D - 81 453 IPR029052 -
Aed7g1319 459 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 43 456 - -
Aed7g1319 459 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 43 456 - -
Aed7g1319 459 SMART pp2a_7 86 433 IPR006186 GO:0016787
Aed7g1319 459 ProSitePatterns Serine/threonine specific protein phosphatases signature. 194 199 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1319 Aed-Chr7 10935281 10941301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1319 39 350 Calmodulin-binding Proteins AT5G63870 67.412 4.54e-151 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1319 K04460 - gmx:100802851 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1319 7 10935281 10941301 Aed7g1319 7 10935281 10941301 ECH