Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1310 ATGATTCGTGAAATAATTGATCTCACCAACTCCCCTCCATCACCATCCCAGCCATTGAGTGAACCCCCTTCTCAAATTGTTACTAGGTTCCCACCAAGTATGCTGGGTAAGGATGCTATCATACCTGATCAAATACCTAAGTCAAACACACACATGATTCCTAATGGAGTTAGATTGAATGAGCCTTGGACTCAGAAAGAGCATGAGTTATTTGAGAAGGGGATAATCAAGTATGGAAATGGACACTGGATCGAAATCGTTGAAGAATTTTTATACAACAAGACTCCTCAACAAGTTCAAAGTTATGCTGCTAACTTTTTCAAGCACCAACCATCATCAACATACCCACTACCACCAACATATCCATCACCACCAATAAATTCACTTGGCTTTGGGAGTAAGAACCCAACCCACTATGCCGCTAACTTTTTCAAGCACCAACCACAACCACCATTAGCATACCCACCACCACCAACATATCCACCACAACCACCATACCCACCACCACCAACAAATTCACCTGGCTTTGGGATTAGGAACCCAACCCACTACGCTGCTAAATTTTTTAAGAACCAACTACCACCAACATATCCACCACAACCACCACCACTAACAAATTCACCTGGCTTTAGGAGTAGGAAGCCTACCTACTATGCTAGTAACTTTTTCAAGCACCAACCACCATTAGCATACCTACCACCACCAACATATCCACCACAACCACCATACCCACCACCACCAACATCTTCACCTAGTTTTGGGAGTAGGAACCCAACCCACTATGCACTTTACCCACCACAACCAACAAACCCATTACTACCAACTTACCCACCACCACCAACATATCCACCTGGCTTTGGGAGTATGAGCCCAACCCTCTACGCACCTTATCCCATGTCAAGGAATTTGAACTCAACGGTAGGTCCATCTGCCTCAAACTCCATGTCTATGATTGTCAACCAGTCACAACTACTCTCCACACCTGTCCCAATGAGTGTTCATTCCCATTTAGTTCTAGAAGCTAGCAGCAACACCCACACCATTGCATATGGGTTCCAAACAAATACAAGTGGTGCAATTGATGATATTGCTGATGATAATCAAGAAATTGATTTAGAGTTGCACTTGGGTTAA 1134 0.4383 MIREIIDLTNSPPSPSQPLSEPPSQIVTRFPPSMLGKDAIIPDQIPKSNTHMIPNGVRLNEPWTQKEHELFEKGIIKYGNGHWIEIVEEFLYNKTPQQVQSYAANFFKHQPSSTYPLPPTYPSPPINSLGFGSKNPTHYAANFFKHQPQPPLAYPPPPTYPPQPPYPPPPTNSPGFGIRNPTHYAAKFFKNQLPPTYPPQPPPLTNSPGFRSRKPTYYASNFFKHQPPLAYLPPPTYPPQPPYPPPPTSSPSFGSRNPTHYALYPPQPTNPLLPTYPPPPTYPPGFGSMSPTLYAPYPMSRNLNSTVGPSASNSMSMIVNQSQLLSTPVPMSVHSHLVLEASSNTHTIAYGFQTNTSGAIDDIADDNQEIDLELHLG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1310 377 PRINTS Proline rich extensin signature 111 127 - -
Aed7g1310 377 PRINTS Proline rich extensin signature 226 251 - -
Aed7g1310 377 PRINTS Proline rich extensin signature 146 167 - -
Aed7g1310 377 PRINTS Proline rich extensin signature 191 208 - -
Aed7g1310 377 MobiDBLite consensus disorder prediction 1 25 - -
Aed7g1310 377 MobiDBLite consensus disorder prediction 194 208 - -
Aed7g1310 377 Gene3D - 61 111 - -
Aed7g1310 377 SMART sant 59 109 IPR001005 -
Aed7g1310 377 Pfam Myb-like DNA-binding domain 62 105 IPR001005 -
Aed7g1310 377 ProSiteProfiles Myb-like domain profile. 62 107 IPR001005 -
Aed7g1310 377 MobiDBLite consensus disorder prediction 229 252 - -
Aed7g1310 377 MobiDBLite consensus disorder prediction 264 279 - -
Aed7g1310 377 MobiDBLite consensus disorder prediction 229 279 - -
Aed7g1310 377 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 36 113 - -
Aed7g1310 377 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 279 377 - -
Aed7g1310 377 MobiDBLite consensus disorder prediction 146 211 - -
Aed7g1310 377 CDD SANT 62 107 IPR001005 -
Aed7g1310 377 SUPERFAMILY Homeodomain-like 62 110 IPR009057 -
Aed7g1310 377 ProSiteProfiles SANT domain profile. 58 111 IPR017884 -
Aed7g1310 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 111 IPR017930 -
Aed7g1310 377 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 36 113 - -
Aed7g1310 377 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 279 377 - -
Aed7g1310 377 MobiDBLite consensus disorder prediction 149 175 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed7g1310 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1310 - K11865 gmx:102659381 127.102