Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1308 ATGACACGCGGGCTGAGACTCCTCCAATCCGCGGCGGCGCCACCGCCCGAGGCTACCGCGGCTGTCGAGTCCGACTTCGTGGTCATCCTCGCAGCGCTCCTCTGCGCCCTTATATGCGTGGTGGGCCTCATCGCCATCGTGCGCTGCGCCTGGCTCCGCCGGGTAACCGTCGCCGGCGCTGGCTCCGGAACATCGCCGGCAACGGCGAACAAGGGCCTCAAGAAGAAGGTGGTGAATTCGCTGCCGAAGTTCACCTACGCCGGCGACGGCGACCGGTGCAAGTCGTCGGAGTGCGCGATTTGCCTGATGGAGTTCGGCGGTGGCGACGAGGTCCGGGTGCTGCCGCAGTGCGGGCACGGGTTCCACGTGGCGTGCGTGGACACGTGGCTCGTGTTGCACTCCTCGTGCCCGTGGTGCCGCGCGCCCTTCGCCGCCGCCGTCACGCGCTGCCAGAAGTGCGGCCACTTCCCGGCGGTAGCCGCCGCATCGGAGTCCAAGGCCGTTGGCGGCATTGTTGCCGCCGGCAGTGCTGCGAATGCTAATGGTAGTAATAATAATGTTATTATTACGAATGGGTTTAGTAATTACGGTTTCTTGCCTTGA 603 0.6484 MTRGLRLLQSAAAPPPEATAAVESDFVVILAALLCALICVVGLIAIVRCAWLRRVTVAGAGSGTSPATANKGLKKKVVNSLPKFTYAGDGDRCKSSECAICLMEFGGGDEVRVLPQCGHGFHVACVDTWLVLHSSCPWCRAPFAAAVTRCQKCGHFPAVAAASESKAVGGIVAAGSAANANGSNNNVIITNGFSNYGFLP 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1308 200 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 188 - -
Aed7g1308 200 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Aed7g1308 200 SMART ring_2 98 139 IPR001841 -
Aed7g1308 200 Pfam Ring finger domain 97 140 IPR001841 -
Aed7g1308 200 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 188 - -
Aed7g1308 200 CDD RING-H2_PA-TM-RING 97 140 - -
Aed7g1308 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 147 IPR013083 -
Aed7g1308 200 SUPERFAMILY RING/U-box 91 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1308 Aed-Chr7 10828908 10829510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1308 1 153 C3H Transcription Factor Family AT1G76410 59.748 6.38e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1308 - - gmx:100813341 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1109 11 16677568 16678614 Aed7g1308 7 10828908 10829510 PCT