Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1303 ATGAAGTTTTTTCCTCCTTTTCTCATCATTTCATTAACCCTAATCGCATTCTTCTTCTTCTTCTGCATCATCATCATCCCAATCTCAGCAACGCCGCATCATCCCTCGCTTCCGAAACACAACAATGAAGAAGAACGCCACACTGCACTTCATCATCGACGATCCCTTCTATCGCTTCCACCTAAGGCTGCAACTACGGCACTAGTTGTGACCCTAGATGGGACTATGTATTTGGTGGACCGATCGGAGAGTGGTTCCCCGAGAGTCATATGGTCGTTCTCGACAGGATCGCCAATCTACCAATCATATCAAGCTTCGATAAAAAATGATAATGGTAAAGAAAATGCATCTGCAGCACTAGTGAGTGGGTTTGTGGAATGCGGGGAAGGGAATGACTGGTCATTGTATATGCATGACAAGCACTTTGGTAAAATGAGAATCTCAGAATCTATTGCAGAATATGTAGCTCGCACACCTACCTTTTCAGATGATGGAGCAGTAACTCTTGGATCCAAAAGAAGTACTTTGTTTGAAGTTGATGCTAAAACTGGATCAATCATTAAAATCCATGCAATGTCTGATTCTGATAATTCTTCTGCACCTTGGAGTGATGGGAAGCAGGGTGTTACAAATATCCTCAACGTAAAGAATAAGGATCTTGCTGATCCTATGAAGCTAAATTCACCACAGCCGCTGCTTAAGATTTTTAGGACAGATTATTCTCTTAAATCTGTTGGTCCTAGCTCAGGAATAGTTTTGTGGACTATGGCAGTAGCTGAATTTGAGGCTGTATTGTTATGCCAACATACCTCTTTTGATCTTGAGCATGACTATACGTCTGACAGTAGCCTCAATTTTGGGATGCCATACCCATGTCAAGAGATAAACCAAGTCTTTCGCCTGAAAAAGAATTTTCGGTTTGAACCTTCACTAACTGAAAGATTACTTGGGGATTATCATGAAAATGATATGCTCTCGATTCCTAACTCAAATCTAATGCTTCCTTCACAGCCAAATATTGATAGATTATTCAATGGTCATGATGATAATATGATGCTCCCTCAACCTCTCGTGGAGATTATAACACCAAGGGAAGTTTATCTGAATAGGACAAGTGAATGGCCAACTCCATTACCTCTTATATTATTTACAGTCTTTCTTCTTGTCTATTCACTCATCTATCCTCTGGTGATTAAGAATCAGGATATACTGAAGGACCAAAACATTGAGTCTGAATTAAAAGGTTCACCTGCTAAGAAAAAGAAAACACGTAAATCAGGGAAGAAAAATGGCACTATTGATACAAGGGAAAAACACTTGTCTCCAGAGAATGAGGATGTTCTGACACAAAAGGATAATGATAAACTGTGGCTGCACTTCAATCAAGCTGATGAAAGTGTTGATGGACGAAGGATTGGTAAATTATTTGTTTCAAATAAAGAGATTGCTAAGGGAAGCAACGGTACCATTGTCCTTGAGGGAATATATGAAGGCCGTGCAGTTGCTGTTAAACGTCTTGTCAAGACTCATCATGATGTAGCTTATAAAGAAATCCAAAACCTGATTATGTCTGATCGTCATCCAAATATTGTCCGATGGCATGGAGTGGAGTATGATAGTGATTTTGTTTACCTTGCTCTGGAACGTTGTACATGCAATTTAGATGACTTGATTCAAATTTATTCAGATATATCAAAAAACTCTATGTTTGGGAAGGACCAAGGTTTTAGATGTTTGATAAAGTCCCAAATGGAGACAGAGAAATATAATACACAATGTCTTTGGAAGGCAAACAGCTATCCATCTCCTCTGTTACTAAAACTAATGAGGGATATTGTTTCTGGGGTTGTTCATTTGCATGAATTGGGAATGATACATCGAGATTTGAAACCACATAATGTTCTTATTATCAAGGAAAGATCTTTGTGTGCAAAACTTTCTGATATGGGGATTAGCAAATGCCTTCTTGAAAATATGTCTTCTTTGGGTAATAGTGCTACTGGTGGTGGTAGTTCAGGTTGGCAAGCTCCAGAACAACTTGTTCAAGGACGTCAAACACGAGCAGTAGATATATTTAGTTTAGGTTGTGTCCTTTTTTTCTGCATTACTGGGGGAAGACATCCATTTGGAGAACCTATTGAACGGGATATCAATATTTTGAAAAATCAAATGGATCTTTTCTTAGTGGAGTTCATTCCTGAAGCCGAAGACCTTATTAGTCGTTTATTAAACCCTAACCCTGATCTAAGGCCAAAGGCGACTGAAGTACTGTACCATCCTTTCTTCTGGAGTTCCGAGATGAGACTTTCCTTTTTACGTGACACCAGTGACAGGGTGGAATTGGAGAATAGAGAGACTAATTCTGATCTTTTGTTGGCATTAGAAAGCATTGCTACAATGGCCTTGGGTGGAAAATGGGATGAAAGGGTGGAACCAGCTTTCATTGCTAACATTGGTCATTACCGGCGGTATAATTTTAACAGTGTTCGAGACTTGTTGCGAGTTATGAGAAACAAACTAAATCATTATAGAGAATTGCCTCGAGAAATCCAGGAACTTGTAGGACCTGTTCCTGAAGGATTCTTCAACTACTTTGCTAGTCGATTCCCAAGACTCTTGATTGAAGTGTATAAAGTTATGCTCCAATACTGCAAGGAGGAAGAATGCTTCCAAAGATATTTTAAAAATGTTGACTAG 2697 0.3919 MKFFPPFLIISLTLIAFFFFFCIIIIPISATPHHPSLPKHNNEEERHTALHHRRSLLSLPPKAATTALVVTLDGTMYLVDRSESGSPRVIWSFSTGSPIYQSYQASIKNDNGKENASAALVSGFVECGEGNDWSLYMHDKHFGKMRISESIAEYVARTPTFSDDGAVTLGSKRSTLFEVDAKTGSIIKIHAMSDSDNSSAPWSDGKQGVTNILNVKNKDLADPMKLNSPQPLLKIFRTDYSLKSVGPSSGIVLWTMAVAEFEAVLLCQHTSFDLEHDYTSDSSLNFGMPYPCQEINQVFRLKKNFRFEPSLTERLLGDYHENDMLSIPNSNLMLPSQPNIDRLFNGHDDNMMLPQPLVEIITPREVYLNRTSEWPTPLPLILFTVFLLVYSLIYPLVIKNQDILKDQNIESELKGSPAKKKKTRKSGKKNGTIDTREKHLSPENEDVLTQKDNDKLWLHFNQADESVDGRRIGKLFVSNKEIAKGSNGTIVLEGIYEGRAVAVKRLVKTHHDVAYKEIQNLIMSDRHPNIVRWHGVEYDSDFVYLALERCTCNLDDLIQIYSDISKNSMFGKDQGFRCLIKSQMETEKYNTQCLWKANSYPSPLLLKLMRDIVSGVVHLHELGMIHRDLKPHNVLIIKERSLCAKLSDMGISKCLLENMSSLGNSATGGGSSGWQAPEQLVQGRQTRAVDIFSLGCVLFFCITGGRHPFGEPIERDINILKNQMDLFLVEFIPEAEDLISRLLNPNPDLRPKATEVLYHPFFWSSEMRLSFLRDTSDRVELENRETNSDLLLALESIATMALGGKWDERVEPAFIANIGHYRRYNFNSVRDLLRVMRNKLNHYRELPREIQELVGPVPEGFFNYFASRFPRLLIEVYKVMLQYCKEEECFQRYFKNVD 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1303 898 Pfam Protein kinase domain 478 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1303 898 SMART serkin_6 476 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1303 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Aed7g1303 898 Gene3D Transferase(Phosphotransferase) domain 1 580 764 - -
Aed7g1303 898 SMART PGNneu 827 881 - -
Aed7g1303 898 CDD RNase_Ire1 766 894 - -
Aed7g1303 898 Gene3D - 46 270 IPR015943 GO:0005515
Aed7g1303 898 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 19 894 - -
Aed7g1303 898 Gene3D Phosphorylase Kinase; domain 1 463 548 - -
Aed7g1303 898 MobiDBLite consensus disorder prediction 428 446 - -
Aed7g1303 898 Pfam Ribonuclease 2-5A 768 894 IPR010513 GO:0004540|GO:0006397
Aed7g1303 898 PANTHER IRE1-RELATED 19 894 IPR045133 GO:0004521|GO:0004674|GO:0030968
Aed7g1303 898 SUPERFAMILY Protein kinase-like (PK-like) 470 781 IPR011009 -
Aed7g1303 898 ProSiteProfiles KEN domain profile. 765 896 IPR010513 GO:0004540|GO:0006397
Aed7g1303 898 MobiDBLite consensus disorder prediction 415 446 - -
Aed7g1303 898 Gene3D KEN domain 765 898 IPR038357 -
Aed7g1303 898 ProSiteProfiles Protein kinase domain profile. 476 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1303 898 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 70 204 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1303 Aed-Chr7 10729754 10739004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1303 502 761 MAP Kinase Kinase Kinase AT3G06030 27.652 1.54e-20 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Aed7g1303 Pkinase 1.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1303 K08852 - gmx:100788389 1588.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1303 7 10729754 10739004 Aed7g1303 7 10729754 10739004 ECH
Aed11g1112 11 16700275 16712075 Aed7g1303 7 10729754 10739004 ECH
Aed11g1112 11 16700275 16712075 Aed7g1303 7 10729754 10739004 PCT