Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1302 ATGATTGGAGTTTGGCTTATGGTGGTGTTGATGGTTCTCTCCAAAGGGTTATCTTCAACTGGGGTTGTTGTATCAGATAATTCCACAGTACCTGCTTTTGTAAATGTTGGGGTTCTCTATTCTTTCAATACCAGTGTTGGTAGAATGGTGAAAATTGCTGTACAAGCTGCAGTTGATGATGTAAATTCTGATCCATCTATTCTTACAAACACTAACTTGAAGGCCTCATTTCAAGAAGATACCAAATATAGAGGTTTTCTAAGCATTGCTGAGGCCTTGCAGCTCATGGCAACACAAACTGTGGCTATAATAGGCCCCCAGACCTCTACAACAGCTCATGTCATATCTCATATAGCGAACGAGCTCCAAGTTCCGCTGCTATCATTTACGGCCACTGACCCTACTCTTTCTTCTCTTCAATTCCCATTCTTTATTAGAACTGCTTTTAGTGACATTTATGAAATGACTGCAATAGCAGACTTTGTTAACTACTTTGGATGGAGAGAGGTTATTGCAGTTTATGGTGATGATGACCATGGGAGGAATGGAATTGGTGCATTAGGGGATAAGCTTGCCGAGAGACGTTGCAAGATCTCATTTAAAGCACCTATGACTCCTGAGACAACTCGGGAGGAGATTACTGATGTGCTTGTTCAGGTGGCCTTGGCAGAATCCCGGGTTATAGTTCTTCATACAAGTACTGCTTGGGGCCCAAAAGTGTTAAGTGTGGCAAAGTCTCTGGGAATGATGGAAAACGGGTATGTCTGGATAACAACTACTTTTCTCTCCACTTGGTTGGATATAGGTAGTCCCCTATCTCCGGATGCGACGGATGATATGCAAGGAGTCATTACACTACGTATGTATATACCTGATTCGGAGCGCAAAAAATGGTTTTTTTCTAGGTGGAAAAACTTGACTACTGGAAAGATGGCTACTGGTTCCCTTGGTTTGAGTACCTATGGTATCTTTGCATATGACACTGTTTATGCTCTTGCTCATGCACTTGATGCATTTTTCAAGCAAGGGAACCAAATTACATTTTCACGTGATCCAAAGTTATCTCAACTACGTGGAGACAGCATGCATCTTGATGCTGTGAAAATATTCAATGAAGGAAAGCTGTTGCGGAAATATATTTATGAGGTTAACATGACTGGTGTATCAGGTCTATTCAAGTATACATCTGATGGAAACCTTGTTAATCCTGCATATGAAGTCATCAATGTGATTGGAACAGGGTCTCGGAGGGTTGGTTATTGGTCTAATTACACTGGCTTATCGATTGTTCCTCCAGAAGCACTTTATTCAAAACCACCTAATCGATCCAGTGCAAGCCAAAAGCTGCTCCCTGTACTTTGGCCTGGAGAAACAACCCATAAGCCTCGTGGTTGGGTTTTTCCAAACAATGGAAGAATGTTAAAAATTGGAGTGCCAAAAAGGGTTAGTTACCGAGAATTTGTCTCTCAAGTACAAGGCACTGACATGTTCAAGGGATTTTGCATTGATGTATTTCTTTCTGCAGTGAACTTGTTGCCCTATGCTGTTCCCTATAAATTTATTTCATATGGGGATGGTAACATCAATCCTAGTAATACTGAGCTTGTCCGTCTTATCACAGCGGGTGTCTTCGATGCTGCAGTAGGTGACATTACAATTACTACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTCTAGTGGTAGTTGCATCAGTTAAGAAGACAGATTCCAATGCTTGGGCGTTTTTGACACCATTTACACCGATGATGTGGACTGTCACGGCTGTCTTTTTTCTACTAGTGGGAGCTGTTGTTTGGATTTTAGAGCATAGGCTGAATGATGATTTTAGGGGAACTCCGAAACAACAAATGGTCACAATTTTGTGGTTTAGTTTTTCAACCATGTTCTTTGCTCACAGGGAAAATACAGTGAGCACTCTCGGTCGCTTTGTGCTACTTATATGGTTATTTGTAGTTCTAATAATCAACTCAAGTTACACGGCAAGCTTGACATCAATCCTTACAGTGCAACAACTTTCTTCACCTGTTAAAGGCATTGAAAGTTTAATAAGTAGCAAAGAGCCTATCGGCTACTTGCAGGGTTCATTTACTCGAACTTATTTAATTGAGGAAGTTGGTATTGATGAATCCAGACTGGTTCCTCTAAAAACAGCAGAAGAAACTACAGAAGCACTTAAGAAAGGTCCCCAGAAGGGTGGTGTTGCTGCATATGTTGATGAGCGTGCTTACATAGAGCTCTTCCTTTCAAGCCGGTGTGATTATAGCATTGTAGGTCAAGAGTTTACCAGAAATGGTTGGGGATTTGCCTTTCCGCGAGACTCACCGTTAGCAGTGGACCTTTCCACTGCCATATTAGAGTTGGCAGAGAATGGAGACTTGCAAAGGATCCATGACAAATGGCTTTTGAGTAGTGCTTGCCTATCACAAGGTTCAAAGCTTGAAGTGGACAGGCTTAACCTGAGAAGCTTTTGGGGCCTCTATCTGGTGTGTGGCTTGGCATGTGTGCTTGCTCTCCTCATATATTTCATTCAGACCATGAGGCAGTACTCCAAGCACGGCCCTGAGGAGCTCGAGTCTTCCGGCCACGGCACAGGATCTTCGTCATCGCGTCTACGCACATTCCTTACGTTCGTAGATAAAAAGGACGAAGAGATCGTTAAAAGCCGCTCCAAGAGGAAGAAAATGGAGAGAATATCATACAGAAGCAATAGTGAGGTTGGATCATCCATCACCATCAACAAAGCATATTCTCAGGCATCAATGAACAGAATTGATTCAGTTGTTGAAATCTAA 2832 0.4213 MIGVWLMVVLMVLSKGLSSTGVVVSDNSTVPAFVNVGVLYSFNTSVGRMVKIAVQAAVDDVNSDPSILTNTNLKASFQEDTKYRGFLSIAEALQLMATQTVAIIGPQTSTTAHVISHIANELQVPLLSFTATDPTLSSLQFPFFIRTAFSDIYEMTAIADFVNYFGWREVIAVYGDDDHGRNGIGALGDKLAERRCKISFKAPMTPETTREEITDVLVQVALAESRVIVLHTSTAWGPKVLSVAKSLGMMENGYVWITTTFLSTWLDIGSPLSPDATDDMQGVITLRMYIPDSERKKWFFSRWKNLTTGKMATGSLGLSTYGIFAYDTVYALAHALDAFFKQGNQITFSRDPKLSQLRGDSMHLDAVKIFNEGKLLRKYIYEVNMTGVSGLFKYTSDGNLVNPAYEVINVIGTGSRRVGYWSNYTGLSIVPPEALYSKPPNRSSASQKLLPVLWPGETTHKPRGWVFPNNGRMLKIGVPKRVSYREFVSQVQGTDMFKGFCIDVFLSAVNLLPYAVPYKFISYGDGNINPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKTDSNAWAFLTPFTPMMWTVTAVFFLLVGAVVWILEHRLNDDFRGTPKQQMVTILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIESLISSKEPIGYLQGSFTRTYLIEEVGIDESRLVPLKTAEETTEALKKGPQKGGVAAYVDERAYIELFLSSRCDYSIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLSSACLSQGSKLEVDRLNLRSFWGLYLVCGLACVLALLIYFIQTMRQYSKHGPEELESSGHGTGSSSSRLRTFLTFVDKKDEEIVKSRSKRKKMERISYRSNSEVGSSITINKAYSQASMNRIDSVVEI 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1302 943 Gene3D - 473 584 - -
Aed7g1302 943 SUPERFAMILY Periplasmic binding protein-like II 449 816 - -
Aed7g1302 943 Gene3D - 52 402 - -
Aed7g1302 943 SUPERFAMILY Periplasmic binding protein-like I 31 465 IPR028082 -
Aed7g1302 943 CDD GluR_Plant 472 814 - -
Aed7g1302 943 Pfam Bacterial extracellular solute-binding proteins, family 3 531 814 IPR001638 -
Aed7g1302 943 PIRSF IGluLR_plant 2 941 IPR017103 -
Aed7g1302 943 SMART GluR_14 475 816 IPR001320 GO:0015276|GO:0016020
Aed7g1302 943 Pfam Receptor family ligand binding region 51 412 IPR001828 -
Aed7g1302 943 Gene3D - 585 712 - -
Aed7g1302 943 Pfam Ligand-gated ion channel 815 847 IPR001320 GO:0015276|GO:0016020
Aed7g1302 943 Gene3D - 761 821 - -
Aed7g1302 943 Gene3D - 150 427 - -
Aed7g1302 943 CDD PBP1_GABAb_receptor_plant 35 431 IPR044440 -
Aed7g1302 943 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 12 935 - -
Aed7g1302 943 PANTHER GLUTAMATE RECEPTOR 12 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1302 Aed-Chr7 10723748 10728914 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1302 5 919 Ion Channels AT3G51480 57.563 0.0 1128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1302 K05387 - gmx:100788917 1742.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1302 7 10723748 10728914 Aed7g1302 7 10723748 10728914 ECH
Aed11g1113 11 16719012 16723640 Aed7g1302 7 10723748 10728914 ECH
Aed11g1113 11 16719012 16723640 Aed7g1302 7 10723748 10728914 PCT