Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1301 ATGCAAGTGCCTCTGCTTTCATTTGCAGCAACAGACCCTACACTCACTTCACTTCAGTTCCCATATTTTGTTAGGACAACACAAAGTGATCTGTATCAGATGGCTGCTGTGGCTGAAATTGTTGACCACTTTCAGTGGAGAGATGTCATAGCAATTTACATTGATGATGATCATGGAAGAAATGGGGTAGCTGCCTTAGGCGACAAGCTAGCTGAGAAACGTTGTAAAATATCATATAAAGTACCATTTAGGCCAAATAACATTACCAGGGAAGAGATAAACAATGTATTAGTAAACATAGCTTTAATGGAATCAAGGGTAATAGTCCTTCACATGTACCCTTCTTCTGGTCTAGAAGTAATTCATCACGCGGCTCGGTCGCTTGGCATGATGGGAAGTGGCTATGTGTGGATAGCCACAGATTGGCTTTCCACAGTGCTAGATTCAGAACTATCCTTGCTCTCATCTTCAGTCATGAATGACATCCAAGGTGTTATCACCTTGCGCATGCACACACAAGAATCAGACATGAAAAAACAGTTCATTTCTAGGTGGAAAAAACTGAACCAAAGGGAAGATCCTAATCAGGAGCCTTCTGGGTTGAATATCTTCGGCCTCTACGCCTATGACACGGTTTGGATGCTTGCTTCCGCTCTCGATGCATTTTTTAAGGATGGGGGGACTTTGTCATTTACAAATGATTCAAGCCTAAACATGTTAAGAGGGGACACCCTTAACCTTGATACTATGGGGGTCTTTGTTGATGGTAACATGTTACTTCAAAAAATTCTAGAGGTGAACAGAACCGGTTTAACCGGCCAAATGGTGTTTAGTCCAGATGGAAACTTAATGCATCCATCATATGAAATCATCAATGTTATAGGAACTGGAATTAGAAGGATTGGTTATTGGTCTGAAACTTCTGGTCTTCACACTGGGGAAGGTGCTAATCATTCCAATTATAGTGAAGGACTATATGGTGTGATATGGCCTGGTCAAACAACTCAAACCCCACGTGGTTGGGTTTTTGCTAGCAGTGGAAGACACTTGAGAATTGGAGTGCCACTTAGAATCAGTTACCGTGAGTTTGTGTCAAAAATTGAAGGAACTGAGATGTTTGGTGGTTATTGCATAGATGTGTTCACTGCTGCACTCAACCTGTTGCCTTATCCTGTACCATTCAAGTTTATTCCATTTGGTGATGGTAAAACCAATCCATTAAATTCAGACCTTCTTCACAAGATCACAACTGGTGCCTTTGATGCTGTGGTGGGGGACATTACCATTACTACAAACCGAACTAAGATAGTGGATTTTACACAGCCATATATTGAGTCTGGTCTAGTTGTTGTGGCACCTATAAAGAAGCTGAAATCAAGTGCTTGGGCTTTCCTCACACCATTCACTCCAATGATGTGGTTTGTGACAGCAATGTTTTTCTTAGTTGTTGGAGCTGTTGTGTGGATTTTAGAGCGTCGCATAAATGATGACTTTAGAGGCCCTCCTAGAAGACAATTTGTCACCATTCTCTGGTTTAGCTTTTCAACTCTATTTTTTGCACATAGAGAGAAAACTGTGAGCACCCTTGGTCGTTTAGTGCTAATAATATGGCTGTTTGTGGTTTTGATACTCAACTCAAGCTATATTGCAAGCCTCACCTCCATTCTAACAGTGGAACAACTCTCATCCCCAGTTAAAGGAATTGAAAGCTTGGTAATAAGTAGCGACCAAATCGGTTTCCTGAGGGGTTCATTTGCTGAGAACTATCTGACTGAAGAGCTCAACATACATAGGTCCAGGCTTGTTCCTCTCAACTCCCCATCAGAATATGAAAAGGCCTTGAAGGATGGACCAGCCAATGGTGGTGTTGCTGCAATAATAGATGAACGTGCATATATGGAGCTCTTCCTAGCAACTAGATGTGAATTTGGTATCGTTGGTCAAGAGTTCACCAAGATGGGATGGGGTTTTAGCTTCCCAAGGGAATCTCCCCTAGCAATTGACATGTCAACTGCCATCCTAAAACTATCAGAAAATGGTGATCTTCAGAGAATTCATGACAAATGGCTAACAAGAAGTGCATGCAGCTCAGAGGGTGCAAAACAAGGCATAGACAGGCTTGAGCTAAAAAGTTTTTGGGGTTTGTTCCTATTGATTGGCATAGCATGCTTCATTGCACTTCTTTGCTATGTTATTAGAATGGCCTACCGTTTTAGCAGACACCCCAATAGTAACGTTCTTGAGGGATCATCAAACTCTACTCTTCTTAGATCATTCTTTACCTTTGTGAATGAAAGAGAAGAGGAGAAAGACAAATACAGGCCAAAGAGAAGGAGAAAGGAGATGTGTTCTTGTAGAAAGGTAGTGCATGAAGAAGATGAATCTTTGGATGACTCAACTGTTCGTGTCCACAATGAAAACAATGCCACTGCCCAAGATTAA 2442 0.4161 MQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMAAVAEIVDHFQWRDVIAIYIDDDHGRNGVAALGDKLAEKRCKISYKVPFRPNNITREEINNVLVNIALMESRVIVLHMYPSSGLEVIHHAARSLGMMGSGYVWIATDWLSTVLDSELSLLSSSVMNDIQGVITLRMHTQESDMKKQFISRWKKLNQREDPNQEPSGLNIFGLYAYDTVWMLASALDAFFKDGGTLSFTNDSSLNMLRGDTLNLDTMGVFVDGNMLLQKILEVNRTGLTGQMVFSPDGNLMHPSYEIINVIGTGIRRIGYWSETSGLHTGEGANHSNYSEGLYGVIWPGQTTQTPRGWVFASSGRHLRIGVPLRISYREFVSKIEGTEMFGGYCIDVFTAALNLLPYPVPFKFIPFGDGKTNPLNSDLLHKITTGAFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIKKLKSSAWAFLTPFTPMMWFVTAMFFLVVGAVVWILERRINDDFRGPPRRQFVTILWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVISSDQIGFLRGSFAENYLTEELNIHRSRLVPLNSPSEYEKALKDGPANGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFSFPRESPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELKSFWGLFLLIGIACFIALLCYVIRMAYRFSRHPNSNVLEGSSNSTLLRSFFTFVNEREEEKDKYRPKRRRKEMCSCRKVVHEEDESLDDSTVRVHNENNATAQD 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1301 813 CDD GluR_Plant 350 690 - -
Aed7g1301 813 Gene3D - 461 596 - -
Aed7g1301 813 PANTHER GLUTAMATE RECEPTOR 1 811 - -
Aed7g1301 813 Pfam Bacterial extracellular solute-binding proteins, family 3 409 691 IPR001638 -
Aed7g1301 813 SUPERFAMILY Periplasmic binding protein-like I 2 341 IPR028082 -
Aed7g1301 813 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 811 - -
Aed7g1301 813 Pfam Ligand-gated ion channel 692 723 IPR001320 GO:0015276|GO:0016020
Aed7g1301 813 Pfam Receptor family ligand binding region 1 295 IPR001828 -
Aed7g1301 813 Gene3D - 29 310 - -
Aed7g1301 813 SUPERFAMILY Voltage-gated potassium channels 472 557 - -
Aed7g1301 813 Gene3D - 610 697 - -
Aed7g1301 813 SUPERFAMILY Periplasmic binding protein-like II 326 692 - -
Aed7g1301 813 PRINTS Metabotropic glutamate GPCR signature 33 49 IPR000337 GO:0004930|GO:0007186|GO:0016021
Aed7g1301 813 PRINTS Metabotropic glutamate GPCR signature 14 33 IPR000337 GO:0004930|GO:0007186|GO:0016021
Aed7g1301 813 PRINTS Metabotropic glutamate GPCR signature 49 66 IPR000337 GO:0004930|GO:0007186|GO:0016021
Aed7g1301 813 PIRSF IGluLR_plant 1 813 IPR017103 -
Aed7g1301 813 Gene3D - 1 285 - -
Aed7g1301 813 SMART GluR_14 351 692 IPR001320 GO:0015276|GO:0016020
Aed7g1301 813 Gene3D - 347 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1301 Aed-Chr7 10698187 10701820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1301 1 777 Ion Channels AT1G42540 59.849 0.0 955
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1301 K05387 - gmx:100789442 1475.3