Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1298 ATGAGAAAAGTTCTGCTTCTACTCTTTGTGATGTTCTACTATGGCTTTCCTTCAAAAGGAATCACCCGTGTTTCTACAACAAGACCAAGTACCGTTAACATAGGGGCACTTATGTCCTTCAATTCAACCGTTGGCAGAGTAGCTAAAGTTGCCATAGAAGCTGCAGTTGATGATATAAACTCCAATGCAACAATTCTGAATGGAACTAAGCTTAATATAACAATGCTAGACACCAAACTATCCACTGGATTCCTAGGAATCATTGATTCATTAAGATTGATGGAGAGTGGCACTGTGGCCATAATTGGTCCCCAGTACTCAGTCATGGCACATGTGATATCACACATAGCAAATGAGATGCAAGTGCCTCTACTTTCATTTGCAGCAACAGACCCTACACTCACTTCACTTCAGTTCCCATATTTTAGTGATCTCTATCAGATGGCTGCTGTGGCTGAAATTGTTGACCACTTTCAATGGAGAGATGTCATAGCAATTTACATTGATGATGATCATGGAAGAAACGGGGTGGCTGCCTTAGGCGACAAGCTAGTTGAGAAACGCGGTAAAATATCACATAAATCACCATTTAGGCCTAATAACATTACTAGGGAAGAGATAAACAGTGCATTAGTTAAGATAGCTTTAATGGAATCAAGGGTAATAGTCCTTCACATATACCCTTCTTTTGGTCTAGAAGTGCTTCATGTGGCTAGATCACTTGGCATGATGGGAAGTGGCTATGTGTGGATAGTTACAGATTGGCTTTCTACATTGCTGGATTCAAATCCATCCTTGTTCACAAGCCAAGCCATGAATGACATCCAAGGTGTTATCACTTTGCGCATGTATACACCAGAGTCAGAAACCAAAAGAAAGTTTAGTTCCAAGTGGAACAAACTTAGCCAAGTAAAGGATCCTGAAAAGGGTCCTTTTGCATTGAACACCTTTGGCCTTTATGCCTATGACACGGTTTGGATGCTTGCTTCCGCACTCGATGCATTTTTTAAGGATGGGGGGACTTTGTCATTTTCGAATGATTCTAGTCTAAACATGTTAAGAGGTGACACTCTTCACATGGATACTATGGGGGTCTTTATTGATGGTAACATGTTGCTTCAGAAAATTTTAGAAGTGAACATAACTGGCTTAACAGGTCAAATGATGTTTGGTCCAAATGGGAACTTAGTGGATCCATCATATGAAGTGATTAATGTGATAGGCACTGGAATTAGAAGGATTGGTTATTGGTCTGAAGCTTCTGGTCTTCACACTGGGGAAGCTCCTAATCATTCAAATTCTAGTGAAGGACTATATGGTGTCATTTGGCCTGGTCAAACAACTCAAACCCCACGTGGTTGGGTTTTTGTTAGCAATGGAAGACACTTGAGAATTGGAGTGCCGCTTAGAATCAGTTACCGTGAGTTTGTGTCAAGAACTGAGGGGACTGAGATGTTTGGTGGTTATTGCATAGATGTGTTCACTGCTGCACTCAACTTGTTGCCTTATCCTGTTCCCTACAAGTTTGTTCCATTTGGAGATGGTAAAACCAACCCATTAAATACAATACTTCTCAACAAGGAGTTTGATGCTGTTGTGGGGGACATTACAATTACCACCAACCGAACTAAGATAGTGGATTTTACACAGCCATATATTGAGTCTGGTTTAGTTGTTGTGGCACCTATTAGGAAGATGAAATCAAGTGCCTGGGCTTTCCTGAGGCCATTCACTCCAATGATGTGGTTTGTGACAGGAATGTTTTTCTTGGTTGTGGGAGCTGTTGTTTGGATTCTAGAACGTGGCTTAAATGAAGACTTTAGAGGCCCTGCAAGAAGGCAGTTTGTGACCATTATATGGTTTAGCTTTTCAACCCTCTACATTGCAAGTCTCACCTCCATCCTAACTGTGGAACAGCTCTCATCATCGGTTAAGGGAATCGAAAGCTTGACAGCAAGCAACGAGCGCATCGGTTTCCTGAGTGGCTCCTTTGCTGAAAGCTATCTGACAGAGGAACTCAACATTCACAGATCAAGGCTTGTTCCTCTCAACTCGCCATCAGAATATGAAAAGGCCCTGAAGCATGGTCCTGCTAATGGAGGTGTCACTGCAATAATAGATGAACGTGCATACATGGAGCTGTTCCTTGCAACCAGATGTGAATATGGTATTGTTGGCCAAGAGTTCACTAAGATGGGGTGGGGATTTAATGGTGATCTTCAAAGAATTCATGACAAATGGCTGACAAGAAGTGCATGCAGCTCAGAGGGTGCAAAACAAGGCATAGACCGGCTTGAGCTAGAAAGCTTTTGGGGTTTGTTCCTATTGAGTGGCATAGCATGCTTCATTGCTCTTCTTTGCTATGTTATTAGAATGGCCTACCGTTTTAGCAGACACCCCAACAGTAATGTCCCTGAGGGATCATCAAACTCTACTCGTCTTAGATCATTCTTTACCTTTGTCAATGAAAGAGAAGAGGAGGAAGACGACAAAAATATGATGTCAAAGATCAGAAAACGAACTGAAAAGGGATCTAGCAGAAGGGTGGCGCATGATGAAGATGAATTGGATGACTCAAGTGTCAGTGTTCATATCAAAAACGATGCATAA 2610 0.4192 MRKVLLLLFVMFYYGFPSKGITRVSTTRPSTVNIGALMSFNSTVGRVAKVAIEAAVDDINSNATILNGTKLNITMLDTKLSTGFLGIIDSLRLMESGTVAIIGPQYSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFSDLYQMAAVAEIVDHFQWRDVIAIYIDDDHGRNGVAALGDKLVEKRGKISHKSPFRPNNITREEINSALVKIALMESRVIVLHIYPSFGLEVLHVARSLGMMGSGYVWIVTDWLSTLLDSNPSLFTSQAMNDIQGVITLRMYTPESETKRKFSSKWNKLSQVKDPEKGPFALNTFGLYAYDTVWMLASALDAFFKDGGTLSFSNDSSLNMLRGDTLHMDTMGVFIDGNMLLQKILEVNITGLTGQMMFGPNGNLVDPSYEVINVIGTGIRRIGYWSEASGLHTGEAPNHSNSSEGLYGVIWPGQTTQTPRGWVFVSNGRHLRIGVPLRISYREFVSRTEGTEMFGGYCIDVFTAALNLLPYPVPYKFVPFGDGKTNPLNTILLNKEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKMKSSAWAFLRPFTPMMWFVTGMFFLVVGAVVWILERGLNEDFRGPARRQFVTIIWFSFSTLYIASLTSILTVEQLSSSVKGIESLTASNERIGFLSGSFAESYLTEELNIHRSRLVPLNSPSEYEKALKHGPANGGVTAIIDERAYMELFLATRCEYGIVGQEFTKMGWGFNGDLQRIHDKWLTRSACSSEGAKQGIDRLELESFWGLFLLSGIACFIALLCYVIRMAYRFSRHPNSNVPEGSSNSTRLRSFFTFVNEREEEEDDKNMMSKIRKRTEKGSSRRVAHDEDELDDSSVSVHIKNDA 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1298 869 SUPERFAMILY Periplasmic binding protein-like II 439 750 - -
Aed7g1298 869 PANTHER GLUTAMATE RECEPTOR 627 868 - -
Aed7g1298 869 SUPERFAMILY Periplasmic binding protein-like I 28 454 IPR028082 -
Aed7g1298 869 Gene3D - 570 626 - -
Aed7g1298 869 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 12 629 - -
Aed7g1298 869 Gene3D - 50 398 - -
Aed7g1298 869 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Aed7g1298 869 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Aed7g1298 869 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 321 333 - -
Aed7g1298 869 Gene3D - 454 569 - -
Aed7g1298 869 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 627 868 - -
Aed7g1298 869 Pfam Bacterial extracellular solute-binding proteins, family 3 473 711 IPR001638 -
Aed7g1298 869 PIRSF IGluLR_plant 626 737 IPR017103 -
Aed7g1298 869 PIRSF IGluLR_plant 1 629 IPR017103 -
Aed7g1298 869 PIRSF IGluLR_plant 737 868 IPR017103 -
Aed7g1298 869 Pfam Ligand-gated ion channel 712 781 IPR001320 GO:0015276|GO:0016020
Aed7g1298 869 SMART GluR_14 464 750 IPR001320 GO:0015276|GO:0016020
Aed7g1298 869 MobiDBLite consensus disorder prediction 826 869 - -
Aed7g1298 869 Gene3D - 148 423 - -
Aed7g1298 869 PANTHER GLUTAMATE RECEPTOR 12 629 - -
Aed7g1298 869 Pfam Receptor family ligand binding region 50 408 IPR001828 -
Aed7g1298 869 Gene3D - 627 731 - -
Aed7g1298 869 CDD PBP1_GABAb_receptor_plant 33 423 IPR044440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1298 Aed-Chr7 10679519 10684844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1298 8 855 Ion Channels AT1G42540 50.964 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1298 K05387 - gmx:100790502 1540.78