Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1294 ATGGGAGGCTTATTGCACATGTTTGAGTTCAATCAGGGTAGGATGGCCAAGAAAGTTCATGCCCATAAGAACAATAATGGTGACCTGGAAACCTCTGGAAATGGCATGGAGCTGCAAGTAGAAACATCTCAAGTCCAGTGTCCAGAAGAAAAAATACCATACTCTTGTCAAGTGGAAGATGGCTGGTCAAAGAAAAATAGTTACTCAAATGTGGCTTCAGTGAAAAAACTGAACAAAGAGGATTTATCCAAACAATCAGGCACCAGAAATAACACACCAAGCCTTGTGGCAAGGTTGATGGGGATAGACACCATGCCATTACCATTAGGCACTAAATCTGTTGCTCCATTGGATGAAAACAAACATGAAAATATGGAGAGGAAGTTTTTGAAAAAAGGAATGAATCGAAGGGGTTCGGTTGGCAGGGGTTCCTCCAACTTGAATTCTTCTAGCCAGATGGAGTTTGATTCATTTTATCAAGACATTGATGATGATGATGATGATGGTGGTGATGGATGCAGACAGAATTTTGGAAAACCAAGGCCTACTAAGGAACATCCTCAGGAAGAGGAACTCCAAAAGTTCAAGACAGAATTTGAAGCATATCAAGCATCAAGGTTTAAGGAGTGGCCAAAGGAAGATGAAATTGAAAGCGGTTCTAGAAGAATGCTTTCTCAAGAGAATCTAAACAAGGAAAAGATGCTACAGATTGCTAGTTCAAAGATTGATAGCCACACATTTAAGACAAAGCTATCTAATGGTGATATGATGGAATCTTTAAGGTATAAAACACTTAGTAGAGACTTTGAGGAGTCTTTAATGATGAAATCTAGAAGCAGATTAGATATATGTGCTTCTCCCACTAAGATAGTTATCTTGAAGCCTGGTTCTGATAGGATTTGCAATTGCAACCATGAAGAGAATTGCCTCGGTTTATCAGGCACTTTACATGGGAGAAAAGGCATAGAAGATTTTCTTGAGGAAGTGAAAGAGAGGTTGAAATGTGAACTGCAAGGGATTAGAGATAGTGGAGTTGGGACACCTTACAATGAAAAACTATCTTCTGATGCTAAAGAGGTCAGAGAGAGTTTGACTAGAGACACCGGACCAAATTTACTCCGCTCGGAATCGACAAGATCAAGTAAAATGCAGTTCAACGGACCAAGTTCCCCAGAATTTTTCAACATAGATACCAGGAGATTCTTGTCAGAGAGGCTAAGAAATATTGTAAAAAGTGAACTGCATTTGGAGATTCCTGAAGTCGCTTGTTATTTAGACAATGACAGAGTTAGACTAAAGCAAGATACTACTACAAAGTGTGCAAATGACAAGAGCCAGTGGCGAGTTTCAAAAGAGAAAAAAGAATTATTACATACAGGTTCCTATAGACACAAATTAGATGACAATGTGTTGTTGTTCCACAAGGAGTTGTCTCCTAGAAACCTTGAAAGATCCTTGTCTGCTCCGGCATCAGGAACATCGTTTGGGAGGCTTCTTCTAGAGAACCGCCACATTTTAACCGGCGCCCTTATTCAGAGGAAGCTTGAAGCTGTTGAACCAATGCCTGTGGATGTTAAAAGAAAGAAGAAAGATGGATTTAATATCAAAGAAAAACTTTCCAATTTTAAATATACTCTTGGTCTCAGAGGGAAGCTTTTTGGCAAAAGAAGGGTTCAGTCAATACTAGAAACACATGGCAGTGAGTATGGTCCAACTTTGAGAGATATCAGGAGTGGACCAACTGTTCTCATGAAAACTGGTGAGAGACATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCTATGTGCAGCTGTGTTAATGAAGAACATTGGAGACAGACTGGATATTCAAGTCTAACATCAACTCCAGATGTATCTTCATTAGATGATGTTTTTATCCCCAAGGTTTTCAGAGATATCAGCTCTGGTTTGAATGAGCTAAAGAGACAACTCAGTAAACTTGATTCCGACGGCTCTGAGGACTTCACCACAAAGCAGGAGCCTATTGAGTCTGAATTAGTTCAATTGGATGATCCATCAGAATCTTATGTAAGAGATCTTCTTGTTGCCTCTGGTTTGTACTTTGGCTCATGGAACAAGTCTCTATTAAGAGGGGACAACACATTTGCAAAGCCTATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAAAAATCCACAAATGATGAGAACAAGAGCAAGTTAGAGCACAAGGTTTTGCTTGATTTGTTGAATGAGGCACTTTCAATTGTTCTTGGACCACCTTTGACATTGTCTAGATTGAGAAGGAAACTAAGCATAAGCAATGATTCCTCAATGCAGCATCCACCGTGTGGAAAGGAACTACTGAAGTTAGTATGGGACATTGTAAGTGTTTCTTTGAATCCTAGTACATCTAACACATATCCTTATTCACTTGATAGTTTGGTGGAACAAGATCTAGGATCAATCTCTTGGTCTGGACTAACAAATGATCATGTTGATACATTGGAAAGAGAGATGGCATGTGTAATCAGTGATGATTTGGTTGAAGAATTCACAAAGGATATGATGCTCTTTTAG 2562 0.3954 MGGLLHMFEFNQGRMAKKVHAHKNNNGDLETSGNGMELQVETSQVQCPEEKIPYSCQVEDGWSKKNSYSNVASVKKLNKEDLSKQSGTRNNTPSLVARLMGIDTMPLPLGTKSVAPLDENKHENMERKFLKKGMNRRGSVGRGSSNLNSSSQMEFDSFYQDIDDDDDDGGDGCRQNFGKPRPTKEHPQEEELQKFKTEFEAYQASRFKEWPKEDEIESGSRRMLSQENLNKEKMLQIASSKIDSHTFKTKLSNGDMMESLRYKTLSRDFEESLMMKSRSRLDICASPTKIVILKPGSDRICNCNHEENCLGLSGTLHGRKGIEDFLEEVKERLKCELQGIRDSGVGTPYNEKLSSDAKEVRESLTRDTGPNLLRSESTRSSKMQFNGPSSPEFFNIDTRRFLSERLRNIVKSELHLEIPEVACYLDNDRVRLKQDTTTKCANDKSQWRVSKEKKELLHTGSYRHKLDDNVLLFHKELSPRNLERSLSAPASGTSFGRLLLENRHILTGALIQRKLEAVEPMPVDVKRKKKDGFNIKEKLSNFKYTLGLRGKLFGKRRVQSILETHGSEYGPTLRDIRSGPTVLMKTGERHENSTEVPPSPASMCSCVNEEHWRQTGYSSLTSTPDVSSLDDVFIPKVFRDISSGLNELKRQLSKLDSDGSEDFTTKQEPIESELVQLDDPSESYVRDLLVASGLYFGSWNKSLLRGDNTFAKPIGNSVFEEVEEKSTNDENKSKLEHKVLLDLLNEALSIVLGPPLTLSRLRRKLSISNDSSMQHPPCGKELLKLVWDIVSVSLNPSTSNTYPYSLDSLVEQDLGSISWSGLTNDHVDTLEREMACVISDDLVEEFTKDMMLF 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1294 853 MobiDBLite consensus disorder prediction 171 191 - -
Aed7g1294 853 Pfam Domain of unknown function (DUF4378) 683 845 IPR025486 -
Aed7g1294 853 MobiDBLite consensus disorder prediction 139 157 - -
Aed7g1294 853 MobiDBLite consensus disorder prediction 348 371 - -
Aed7g1294 853 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 851 - -
Aed7g1294 853 Pfam DUF761-associated sequence motif 92 106 IPR032795 -
Aed7g1294 853 MobiDBLite consensus disorder prediction 131 191 - -
Aed7g1294 853 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1294 Aed-Chr7 10645196 10649325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1294 74 850 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 37.226 2.64e-121 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1294 - - gmx:100810825 1386.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1294 7 10645196 10649325 Aed7g1294 7 10645196 10649325 ECH
Aed11g1122 11 16766133 16772182 Aed7g1294 7 10645196 10649325 PCT