Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1289 ATGGGATTCTCCGCGACGACGACGACGACGACGAGCAGCAGCGGCGGCGGGCAGAGCCAATTCTCGGAGATCGCGAGCGGGAGCATCGACAGCAGCAGCGAGGGAGGAGGGTCTCTCCCTCGTCCTCTTGCTGTTCCTCTTCCACTTCCGCTTCCTCCTTCTCTTCCTTCACCGGATGGCCAAATTCTTGAAAGGCCGAACCTGAAGGTGTTCAGCTTCGGAGACCTGAAATCGGCGACGAAGAGTTTCAAGTCCGACACATTGCTCGGCGAAGGCGGGTTCGGGAGAGTGTACAAGGGATGGCTGGACGAGAAGACCCTCTCCCCTGCCAAAGCCGGCTCCGGCATGTCCGAAGTGAACTTTTTAGGAAGGCTTTGTCACCCCAACTTGGTCAGGTTATTGGGTTACTGTTGGGACGATGATGAGCTTCTTCTTGTGTACGAGTTCATGCCAAAGGGAAGCTTGGAGAATCATCTTTTCAGAAGAAATCCCAACATAGAACCACTTTCTTGGAACACACGGCTTAAAATAGCTATCGGCGCAGCTCGGGGATTAGCTTTCTTGCACGACTCCGAAAAACAAGTCATATACAGAGATTTCAAGGCCTCAAATATACTTCTCGATGTGAATTTCAATGCAAAAATCTCAGATTTTGGCTTGGCAAAATTGGGGCCTTCTGGGGGACAATCACATGTAACTACGAGGGTCATGGGCACGTATGGTTATGCTGCCCCAGAATATATTGCAACAGGCCACTTGTATGTGAAGAGTGATGTCTATGGCTTTGGTGTAGTGCTCCTTGAAATTCTAACAGCAATGCGGGCACTTGACACAAAAAGACCAACAGGGCAACAGAACCTTGTTGAATGGACCAAGCCTTTACTTTCTTCCAAAAAAAGTTGA 903 0.5006 MGFSATTTTTTSSSGGGQSQFSEIASGSIDSSSEGGGSLPRPLAVPLPLPLPPSLPSPDGQILERPNLKVFSFGDLKSATKSFKSDTLLGEGGFGRVYKGWLDEKTLSPAKAGSGMSEVNFLGRLCHPNLVRLLGYCWDDDELLLVYEFMPKGSLENHLFRRNPNIEPLSWNTRLKIAIGAARGLAFLHDSEKQVIYRDFKASNILLDVNFNAKISDFGLAKLGPSGGQSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTAMRALDTKRPTGQQNLVEWTKPLLSSKKS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1289 300 Gene3D Phosphorylase Kinase; domain 1 61 149 - -
Aed7g1289 300 Pfam Protein tyrosine and serine/threonine kinase 86 272 IPR001245 GO:0004672|GO:0006468
Aed7g1289 300 MobiDBLite consensus disorder prediction 1 35 - -
Aed7g1289 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Aed7g1289 300 MobiDBLite consensus disorder prediction 1 45 - -
Aed7g1289 300 SUPERFAMILY Protein kinase-like (PK-like) 68 293 IPR011009 -
Aed7g1289 300 PANTHER OS01G0588500 PROTEIN-RELATED 28 299 - -
Aed7g1289 300 PANTHER OS02G0670100 PROTEIN 28 299 - -
Aed7g1289 300 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Aed7g1289 300 Gene3D Transferase(Phosphotransferase) domain 1 150 300 - -
Aed7g1289 300 ProSiteProfiles Protein kinase domain profile. 83 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1289 Aed-Chr7 10585930 10590936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1289 59 295 Glycoside Hydrolase AT3G07070 53.629 6.10e-87 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed7g1289 PK_Tyr_Ser-Thr 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1289 - - gmx:100794193 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1289 7 10585930 10590936 Aed7g1289 7 10585930 10590936 ECH