Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1288 GCAACCAAAAGGAGAGGTTCATCGCATGGGTCTGTGCTTCTCCTCCGGCCCGGCACCACCGCACTCCTCTTCCCTGAACCGCCCTCACTTTTATTCAGGCAACTTTTCTTTCTAAATCACGCTCACTCACGACGACTTTTCCGTTATCCTCCAATTTCACTTCCTCTGTTTTCAGGTTCTACAAGCACTGGCAGCAAAACCGCGGGGTTCTCCACAACCACGACCAGCAGCACTGATAAGAGTCAGTTTTCGAGGATTGCTAGCGGAAGTATCAATGGCGAAGGGTCTCTTCACCATCCTCTTCCTTCCGCCGCTAATCGCCAGATTCTGAAATGGCCAGACTTGAAGGTGTTCGATTTTGAGGAGCTGAAATCTGCCACAAGGAATTTCAGGCCTGACAGAGTGATCGGAGATGGTGGGTTTGGCATAGTTTACAAGGGATGGTTGGATGAGAATACCCTCTCCCCTGTCAAACTAGCAGGAAATCCCAACTTTGAACCTCTGTCTTGGAACACCCGGCTTAAAATAACGATCGGTGCAGCTCGGGCATTAGCTTTCTTGCATACATCCAAAAACAATGTCATATTCAGAGATTTCAAGACCTCAAATATACTACTCGATGAGAATTACAATCCAAAAATCTCATATTTTGGCTTGGCAACCAAACGATCACATGTAACTACCAGAATCATGGGCACGAATGGTTATGTTGCTCCAGAATACGTGGCAACAGGTAACTATATCTGCACATAA 753 0.4675 ATKRRGSSHGSVLLLRPGTTALLFPEPPSLLFRQLFFLNHAHSRRLFRYPPISLPLFSGSTSTGSKTAGFSTTTTSSTDKSQFSRIASGSINGEGSLHHPLPSAANRQILKWPDLKVFDFEELKSATRNFRPDRVIGDGGFGIVYKGWLDENTLSPVKLAGNPNFEPLSWNTRLKITIGAARALAFLHTSKNNVIFRDFKTSNILLDENYNPKISYFGLATKRSHVTTRIMGTNGYVAPEYVATGNYICT 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1288 250 PANTHER OS01G0588500 PROTEIN-RELATED 165 247 - -
Aed7g1288 250 Gene3D Phosphorylase Kinase; domain 1 105 163 - -
Aed7g1288 250 Pfam Protein kinase domain 176 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1288 250 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 72 158 - -
Aed7g1288 250 ProSiteProfiles Protein kinase domain profile. 1 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1288 250 Gene3D Transferase(Phosphotransferase) domain 1 164 250 - -
Aed7g1288 250 ProSitePatterns Protein kinases ATP-binding region signature. 136 158 IPR017441 GO:0005524
Aed7g1288 250 PANTHER OS01G0588500 PROTEIN-RELATED 72 158 - -
Aed7g1288 250 MobiDBLite consensus disorder prediction 61 82 - -
Aed7g1288 250 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 165 247 - -
Aed7g1288 250 SUPERFAMILY Protein kinase-like (PK-like) 115 247 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1288 Aed-Chr7 10581377 10583147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1288 116 246 Glycoside Hydrolase AT3G07070 36.410 6.55e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed7g1288 Pkinase 1.8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1288 - - pop:7481536 166.007