Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1287 ATGGGTGTGTGCTTCTCTTTTGGCTCTGCACCTCATCCCTCTTCCCTCAACCGCTCTCACTATTCTTCGAATTCCTTTTCATCAGGTCCAGCAAACGCGGAAATCATTAGTGGAAGCATCCACGAACATGGCGAAGAGTATCTTCGTCTTCCTTTTCCTTTTCCTCCCCGTGATGGACAGATTCTGAAATGGCCAGACCTGAAGGTGTTCGATTTTGAGGAGCTGAAATCCGCCACTATGGATTTCAGGCTCGACTTAGTGGTCGGTGAAGGTGATTTAGGCAGAGTTTACAAGGGATGGTTGGATGAGGATACCCTTACCCCTACCAACGAAGGCTCCGGAATGGTCGTTGCCATCAAAATGTTGCACCCTGAAAGCATGCAAGGCTTTATAAAGTGGCAGTCAGAACTAAACTTTTTAGGAAGGCTTGATCACCCCAACCTGGTCAAGTTATTGGGTTACTGCTGGGACGATGATGATAAGTTTCTTATTGTGTATGAGTTCATGGAGAAGGGAAGCTTGGAGAATAATCTATTCACAAGAGATCCTAACTTAGAATCACTTTCTTGGAACACTCGGCTTAAAATAGCTATTGGTGTTGCTCTGGGATTAACTTTCTTGCATGCCTCAGAAAATCCAGTAATACACAGAGATTTAAAGCCTGCAAATATACTACTTGATAGGGTCAGATATTTTCTATTTATTGATAAGAATTACAATGCCAAAATCTCAGATTTTGGCTTGGGTAAATTGGGTCCTTCTGGAGGAAAAACACATGTAACTACTGGGGTTGCGGGCACGTATGGTTATGCTGCTCCAGAATACAGAGCAACAGGTAACTATGTCCGCACATAA 855 0.4363 MGVCFSFGSAPHPSSLNRSHYSSNSFSSGPANAEIISGSIHEHGEEYLRLPFPFPPRDGQILKWPDLKVFDFEELKSATMDFRLDLVVGEGDLGRVYKGWLDEDTLTPTNEGSGMVVAIKMLHPESMQGFIKWQSELNFLGRLDHPNLVKLLGYCWDDDDKFLIVYEFMEKGSLENNLFTRDPNLESLSWNTRLKIAIGVALGLTFLHASENPVIHRDLKPANILLDRVRYFLFIDKNYNAKISDFGLGKLGPSGGKTHVTTGVAGTYGYAAPEYRATGNYVRT 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1287 284 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 37 282 - -
Aed7g1287 284 ProSiteProfiles Protein kinase domain profile. 82 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1287 284 SUPERFAMILY Protein kinase-like (PK-like) 61 281 IPR011009 -
Aed7g1287 284 SMART serkin_6 82 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1287 284 Gene3D Transferase(Phosphotransferase) domain 1 169 284 - -
Aed7g1287 284 MobiDBLite consensus disorder prediction 1 23 - -
Aed7g1287 284 Pfam Protein tyrosine and serine/threonine kinase 85 280 IPR001245 GO:0004672|GO:0006468
Aed7g1287 284 PANTHER OS01G0588500 PROTEIN-RELATED 37 282 - -
Aed7g1287 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Aed7g1287 284 Gene3D Phosphorylase Kinase; domain 1 66 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1287 Aed-Chr7 10571908 10573746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1287 68 280 Glycoside Hydrolase AT3G07070 48.598 4.80e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed7g1287 PK_Tyr_Ser-Thr 2.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1287 - - gmx:100794193 326.25