Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1246 ATGCCTTACCTGGTCCGAGAGAACCTCTCGATCGGGAACATCGGCGACGCGGCGGAGATTCTCGAAAACGGCGCCTCTCAGAGCGTGACGCACATCCTCTCCGTCCTCAGCTCCGCCTCCATCTCCTTCTTCTCAGAATGGAAAACCAGCCTCTCCATCCCCGCCAAGGAAATCACCAAAGTCCACGTGGCGGACGCCGGCGCCGGAGCCTCCAAATCGGCGCTCCCGCCGGAGAAGCTCCTCTACTCGCTCGAGTATGCCGGCCGCGACCTGAAGCTCGTGCGCATGGCCGTGCCTCTCAGAGACACCGAGAAAGAGGACTTGCTCGATTACCTGGATGTTTGCATCGATTTCATTGATCGCGGACGGAAGGAAGGTTCCGTTCTCGTTCACTGTTTCGCCGGAGTTTCCAGAAGTGCGGCGGTTGTTACGGCGTATTTGATGAGAACCGAACGTCTATCTGTAGAAGATGCCCTTGAATCGTTGAGGCAGAGCTGTGAATTTGTTTGTCCCAACGATGGTTTTCTAGAGCAGTTAAACATGTTCGAGGGGATGGGTTTCAAGGTTGATCACTCCAGCCCTATATACAAACGCTTTCGTCTAAAAATACTACGTATGGCTTCTTCTCACTGGCTTTTTTCTGCTGTTCTGGTATTATGCTTATGCTTATGTTGTGCTCATGTCAATCTTTTTGTCTATTATGAGCATTGA 711 0.5218 MPYLVRENLSIGNIGDAAEILENGASQSVTHILSVLSSASISFFSEWKTSLSIPAKEITKVHVADAGAGASKSALPPEKLLYSLEYAGRDLKLVRMAVPLRDTEKEDLLDYLDVCIDFIDRGRKEGSVLVHCFAGVSRSAAVVTAYLMRTERLSVEDALESLRQSCEFVCPNDGFLEQLNMFEGMGFKVDHSSPIYKRFRLKILRMASSHWLFSAVLVLCLCLCCAHVNLFVYYEH 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1246 236 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 188 IPR020422 GO:0006470|GO:0008138
Aed7g1246 236 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 106 164 IPR000387 GO:0016311|GO:0016791
Aed7g1246 236 SMART dsp_5 1 185 IPR020422 GO:0006470|GO:0008138
Aed7g1246 236 Pfam Dual specificity phosphatase, catalytic domain 94 183 IPR000340 GO:0008138|GO:0016311
Aed7g1246 236 Gene3D Protein tyrosine phosphatase superfamily 4 206 IPR029021 -
Aed7g1246 236 CDD DSP_DUSP12 4 190 - -
Aed7g1246 236 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 3 204 - -
Aed7g1246 236 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 5 188 IPR029021 -
Aed7g1246 236 ProSitePatterns Tyrosine specific protein phosphatases active site. 130 140 IPR016130 GO:0016311|GO:0016791
Aed7g1246 236 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 3 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1246 Aed-Chr7 10125693 10130034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1246 93 183 Protein tyrosine phosphatase (PTP) family AT3G06110 40.217 1.36e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1246 K14819 - gmx:100776877 366.311