Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1243 ATGCACCACTTTGCCATGGATAACAACTCTCAGCTCCTCCAATTCCTTCCCAACACCACCACCAACACCAACAACACCCCCTTCTTCCCCTCACACACCACCACTACTACTAATTCCTCCAACAATAATTACTACCCGTTTCATCTCTCCGAAATTACCGAAACACCCTCCCACCATGATAGAGCCCTTGCTGCCATGAAGAACCACAAGGAGGCTGAAAAGCGAAGGAGGGAGCGAATCAACTCCCACCTCGACCACCTTCGCACTCTTCTCCCTTGTAATTCCAAGACAGACAAAGCTTCGCTTCTGGCCAAGGTTGTCCAGCGGGTGAAGGAGTTGAAGCAGCAAACCTCGGAAATAACCGAACTCGAAACCGTTCCGTCGGAGACCGACGAGATCACGGTGCTCTCCGCCGGCGGAGTCGGCGGCGACGGGAGGCTGATCTTCAAGGCTTCACTGTGCTGCGAGGACCGCTCCGACCTCATCCCGGATCTCATAGAAATCCTGAACTCGCTTCACCTCAAAACCCTCAAAGCGGAAATGGCCACTCTCGGAGGAAGAACGCGCAACGTTCTCGTCGTCGCTGCCGAAAAAGAACACAGCATTGAGTCCATCCATTTCCTTCAGAACTCGCTCAAGTCCCTTCTAGACCGATCCAGCTCCAGCGACAGGTCTAAACGACGCCGTGGCTTAGACCGAAGACTCATTTCTTAA 714 0.5322 MHHFAMDNNSQLLQFLPNTTTNTNNTPFFPSHTTTTTNSSNNNYYPFHLSEITETPSHHDRALAAMKNHKEAEKRRRERINSHLDHLRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITELETVPSETDEITVLSAGGVGGDGRLIFKASLCCEDRSDLIPDLIEILNSLHLKTLKAEMATLGGRTRNVLVVAAEKEHSIESIHFLQNSLKSLLDRSSSSDRSKRRRGLDRRLIS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1243 237 PANTHER TRANSCRIPTION FACTOR BHLH30 9 235 IPR045847 GO:0003700|GO:0006355
Aed7g1243 237 SMART finulus 70 119 IPR011598 GO:0046983
Aed7g1243 237 Gene3D - 59 125 IPR036638 GO:0046983
Aed7g1243 237 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 124 IPR036638 GO:0046983
Aed7g1243 237 CDD bHLH_AtAIG1_like 60 135 - -
Aed7g1243 237 Pfam Helix-loop-helix DNA-binding domain 68 113 IPR011598 GO:0046983
Aed7g1243 237 PANTHER TRANSCRIPTION FACTOR BHLH106-RELATED 9 235 - -
Aed7g1243 237 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 64 113 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1243 Aed-Chr7 10091408 10093279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1243 44 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 69.780 3.12e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed7g1243 HLH 1.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1243 - K22484 gmx:100802566 332.413