Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1238 ATGTTACCTAATTCATTAACTATGATTGCAACAATAATTAGTATTGTTCTTGCACAAACACTTGTGGTGGTGAATTCAGTTCCTGAAGCTGATAAAATAACCAATTTGCCGGGGCAGCCAAAGGTAAAATTTGAGCAGTATTCTGGTCCTGGTTGTTCATCTATTGGTGTTGGAGCTTTAGTTGAGCATGGCCCTTTCAAACCTGGTGACAACAATGTTCTTCTGAGAAATCATTATAGTTGGAACAAAGGGGCAAATGTGCTATACTTGGAATCACCAGCTGGTGTTGGATTTTCGTACTCTAGCAATACATCTTTCTATACCTTAGTGACAGATGAAATTACAGCTAGAGACAATCTTGTTTTCCTGCAACGCTGGTTCACTGAATTCCCTGAGTTCTCACAAAACGAATTCTTCATTACAGGGGAGAGTTATGCAGGTCACTATGCTCCACAACTTGCACAACTTATTGTTCAAACAAAGACCAACTTCAATCTTAAGGGGATAGCAATAGGGAATCCTCTTATGGAATTTGATACTGATTTGAACTCCAAAGCTGAATTCTTTTGGTCTCACGGACTGATTTCAGATTCTACTTACAATCTCTTCACCAGAGTCTGCAACTACTCCACAATTAGGAGACAAATGATCCATGGGAATCTTAGAGACGTTTGTGCAAAAATAAATGAACTTGTGTTTACTGAGGTTAGCGACTATATAGACCAATATGATGTCACTCTTGATGTGTGTCTGTCATCAGCAAATCAACAGGCTTATGTTCTGAATCAAATGCAAGAGACACAAAAGATAGATGTTTGTGTGGATGATAAAGCAGTCACATACTTAAACAGAAAAGATGTGCAGAAGGCTCTCCATGCTAAGCTTGTTGGAGCCTCCAAATGGTCAACTTGCAGCAGTGTTCTCCATTATGACCGTCGCAATCTAGAGATACCAACCTTTTCTATTCTAGGATCACTTGTTAATTCTAACATCAGAGTTCTGGTATACAGTGGAGATCAAGATTCAGTGATTCCATTAATAGGTTCACGATCTCTAGTGAACGGATTAGCCAAGGAACTTGGACTGAATACAACAGTGGCCTACAGAGCCTGGTTTGAGGGAAAACAGGTAGCTGGATGGACACAAGAATATGGAAACATTTTATCATATGCCACTATAAGAGGAGCATCTCATGAAGCTCCCTTCACTCAACCACAGAGATCACTCGTGCTACTTAAAACATTTCTAGAAGGAAGGCCATTACCTAGTGTTAAATAA 1278 0.3959 MLPNSLTMIATIISIVLAQTLVVVNSVPEADKITNLPGQPKVKFEQYSGPGCSSIGVGALVEHGPFKPGDNNVLLRNHYSWNKGANVLYLESPAGVGFSYSSNTSFYTLVTDEITARDNLVFLQRWFTEFPEFSQNEFFITGESYAGHYAPQLAQLIVQTKTNFNLKGIAIGNPLMEFDTDLNSKAEFFWSHGLISDSTYNLFTRVCNYSTIRRQMIHGNLRDVCAKINELVFTEVSDYIDQYDVTLDVCLSSANQQAYVLNQMQETQKIDVCVDDKAVTYLNRKDVQKALHAKLVGASKWSTCSSVLHYDRRNLEIPTFSILGSLVNSNIRVLVYSGDQDSVIPLIGSRSLVNGLAKELGLNTTVAYRAWFEGKQVAGWTQEYGNILSYATIRGASHEAPFTQPQRSLVLLKTFLEGRPLPSVK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1238 425 SUPERFAMILY alpha/beta-Hydrolases 49 422 IPR029058 -
Aed7g1238 425 Gene3D alpha/beta hydrolase 44 421 IPR029058 -
Aed7g1238 425 Pfam Serine carboxypeptidase 49 418 IPR001563 GO:0004185|GO:0006508
Aed7g1238 425 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 423 IPR001563 GO:0004185|GO:0006508
Aed7g1238 425 ProSitePatterns Serine carboxypeptidases, serine active site. 140 147 IPR018202 GO:0004185
Aed7g1238 425 ProSitePatterns Serine carboxypeptidases, histidine active site. 388 405 IPR033124 GO:0004185
Aed7g1238 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 77 89 IPR001563 GO:0004185|GO:0006508
Aed7g1238 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 388 401 IPR001563 GO:0004185|GO:0006508
Aed7g1238 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 151 IPR001563 GO:0004185|GO:0006508
Aed7g1238 425 PRINTS Carboxypeptidase C serine protease (S10) family signature 90 100 IPR001563 GO:0004185|GO:0006508
Aed7g1238 425 PANTHER CARBOXYPEPTIDASE 49 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1238 Aed-Chr7 10042297 10045120 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1238 278 421 Calmodulin-binding Proteins AT2G22960 29.167 4.99e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1238 K16297 - gmx:100793889 768.459